Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g1087 | ATGGCGGACATTCTCGCTGCTTTGAGGTCTCTGATGGCTTCTCACTCTCCGCCCTTGGATGCCTTGGCGGTCCCTTCTGAAGATTACCATCAGAGCGAGTACGTATCTGCAAGGGACAAAAGGCGCGCATTCGTTTCGGGATTCACCGGAAGTGCTGGCTTGGCACTTATTACCATGAATGAAGCACGGTTATGGACCGATGGACGATACTTCTTGCAGGCATCACAGGAGCTAAGCGACCAGTGGAAACTCATGCGCCTTGGAGAAGACCCTGGTGTAGATATCTGGATGGCAGATAATCTGCCAAACAATGCAGCTGTTGGTATTGATCCTTGGTGCATATCAGTGGATACTGCACAAAGATGGGAGCGTGCTTTTACCAAAAAACGGCAAAAGCTGGTCCAAACATCCACAAACTTGGTAGATGAAGTTTGGAAAAATCGGCCACCAGCTGAAACTAATCCTGTCATTATACAGCCAGTAGAATTTGCTGGTCGTTCTGTAGCTGATAAGTTGGAGGATTTGAGAGAAAGGCTCATGCAGGAGAAAGCTCAGGGTATAATTATCACAGCGCTTGATGAGGTTGCTTGGTTATATAATGTTCGTGGGACTGATGTGTCTTACTGTCCAGTTGTTCATGCATTTGCTATAGTGACATCCAAATCAGCTTTCTTTTATGTTGACAAGAAGAAGGTCTCTTCTGAGGTAAACTCCCATATGGAAGAAAATGGAATTGAAGTTCGAGAGTATGGTGAAGTTAGCTCAGATGTAGCCTTGCTTGCGTCTAATCAACTCAGACCTTCCCCTGTAACTGATATAACAGAGAATGACATAAATGAAGAGGAAGAAAAAACTTGTGGCTTCATATGGGTTGACCCTGGTTCATGCTGCTATGCTTTGTATTCAAAACTGGATTCAGATAAGGTTGTTTTGCAGCAATCACCTTTGGCCATTGCAAAAGCTATCAAGAATCCAGTTGAGTTGGATGGATTAAGAAAGGCACACATTCGGGATGGTGCAGCTGTTGTGCAATATCTTGTTTGGCTGGATAAGCAGATGCAGGAGAATTATGGAGCTGCTGGTTACTTCTTGGAGGTAGAGAGCAAGAACAAGAAACAACAATCATCGGAAACTATGAAACTGACAGAGGTATCTGCAAGTGATAAGCTAGAAAGTTTTCGAGCATCAAAAGAGCATTTTAGAGGATTAAGTTTTCCTACTATTTCATCGGTTGGTCCAAATGCAGCTATCATTCATTATTCTCCAGATGCAGAAACATGTTCTGAGTTAGATCCCGATAGCATTTATCTATTTGATTCTGGAGCGCAGTATCAAGATGGAACAACTGATATAACTCGAACTGTTCATTTTGGAAAACCTTCATCACATGAGAAAGCATGCTATACTGCGGTTCTCAAGGGTCATATCAGTCTGGGTAATGCTCGATTTCCTAGTGGAACCGCTGGACACACACTTGACATTCTTGCTCGTGTCCCATTGTGGAAGGATGGCCTTGATTATCGACATGGAACTGGTCATGGAATTGGATCTTACCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGAACGCCTGCTCGGCATGTGCCATTACAAGCTTCAATGACTGTAACAGATGAACCTGGTTACTACGAGGATGGGAACTTTGGCATAAGATTGGAGAATGTCCTCGTAATCAAGGAGGCTGATACAAAATTCAATTTTGGTGATAAGGGTTACTTGGCATTTGAACACATAACATGGGCACCATACCAAAAAAAGTTGATTGACCAGAGTCTTTTAACGCCTGAAGAGATAGAATGGGTGAACTCCTACCATTCCACCTGTAGAGACATTCTGGCCCCATACCTGGATGAGTCCGAGATGGCATGGCTGAAGAGAAGTACTGAACCCCTAAGTGTGTGA | 1929 | 0.436 | MADILAALRSLMASHSPPLDALAVPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITMNEARLWTDGRYFLQASQELSDQWKLMRLGEDPGVDIWMADNLPNNAAVGIDPWCISVDTAQRWERAFTKKRQKLVQTSTNLVDEVWKNRPPAETNPVIIQPVEFAGRSVADKLEDLRERLMQEKAQGIIITALDEVAWLYNVRGTDVSYCPVVHAFAIVTSKSAFFYVDKKKVSSEVNSHMEENGIEVREYGEVSSDVALLASNQLRPSPVTDITENDINEEEEKTCGFIWVDPGSCCYALYSKLDSDKVVLQQSPLAIAKAIKNPVELDGLRKAHIRDGAAVVQYLVWLDKQMQENYGAAGYFLEVESKNKKQQSSETMKLTEVSASDKLESFRASKEHFRGLSFPTISSVGPNAAIIHYSPDAETCSELDPDSIYLFDSGAQYQDGTTDITRTVHFGKPSSHEKACYTAVLKGHISLGNARFPSGTAGHTLDILARVPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRTPARHVPLQASMTVTDEPGYYEDGNFGIRLENVLVIKEADTKFNFGDKGYLAFEHITWAPYQKKLIDQSLLTPEEIEWVNSYHSTCRDILAPYLDESEMAWLKRSTEPLSV* | 643 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g1087 | 642 | ProSitePatterns | Aminopeptidase P and proline dipeptidase signature. | 509 | 521 | IPR001131 | - | |
| Vvi4g1087 | 642 | FunFam | Xaa-Pro aminopeptidase P | 321 | 640 | - | - | |
| Vvi4g1087 | 642 | Pfam | Creatinase/Prolidase N-terminal domain | 147 | 327 | - | - | |
| Vvi4g1087 | 642 | SUPERFAMILY | Creatinase/prolidase N-terminal domain | 41 | 131 | IPR029149 | - | |
| Vvi4g1087 | 642 | Pfam | Metallopeptidase family M24 | 331 | 569 | IPR000994 | - | |
| Vvi4g1087 | 642 | Gene3D | - | 1 | 145 | IPR029149 | - | |
| Vvi4g1087 | 642 | SUPERFAMILY | Creatinase/aminopeptidase | 324 | 606 | IPR036005 | - | |
| Vvi4g1087 | 642 | FunFam | Probable Xaa-Pro aminopeptidase P | 146 | 319 | - | - | |
| Vvi4g1087 | 642 | FunFam | Xaa-pro aminopeptidase P | 1 | 145 | - | - | |
| Vvi4g1087 | 642 | Pfam | Creatinase/Prolidase N-terminal domain | 5 | 142 | IPR000587 | - | |
| Vvi4g1087 | 642 | Pfam | C-terminal region of peptidase_M24 | 581 | 640 | IPR032416 | - | |
| Vvi4g1087 | 642 | PANTHER | XAA-PRO AMINOPEPTIDASE 1 | 3 | 640 | - | - | |
| Vvi4g1087 | 642 | Gene3D | Creatinase/methionine aminopeptidase superfamily | 321 | 641 | IPR036005 | - | |
| Vvi4g1087 | 642 | Gene3D | - | 146 | 319 | IPR029149 | - | |
| Vvi4g1087 | 642 | CDD | APP | 330 | 577 | IPR033740 | GO:0070006 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g1087 | Vvi-Chr4 | 17712259 | 17747130 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g1087 | K01262 | - | vvi:100242807 | 1292.72 |