Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1086 ATGGAAGGCACAAAACCTCATGCAGCCCTACTCGCTAGCCCTGGCATGGGTCACCTCATCCCCGTTCTCGAGCTTGGAAAGCGCCTTATCACTCATCACGGCTTCCAAGTCACCGTTTTTGTGGTGGCAACTGAAGTCTCACCCGCCCAATCCCTGCTGCTCCAACAAGCCACCACTCCTCATCTCCCTAACTTGGTCTCACTTCCGGTGGTTAATGACTCCATCTTAGTCGACCCAGAAGCATCTGTCCTTGAACAGCTGCTGTCTATGGTACGCGGCTCCCTTCCACGGCTCCGCTCTGCAATCTCGGCCATGAAGGTTCCTCCAACCGTCCTCATAGTCGATATGTTTGGTCTCGAAGCTTTCAAAATCGCTAATGAGTTTGAGATGCTCAAGTACGTTTACATTACTTCAAACGCATGGTTCCTTGCTTTCACCGCATATTTACCCGTCCTCGATAAGCTGGTGGAAACCAAATGCTCTGATCTCCAAGAACCCACTCGAATTCCCGGGTGCAAGCCGTTATGGGTAGAACATGTATTTGAGCCGGTTCTGGACATCAAGAATGAGATGTACCACGCATACATGCGCATGGCGGTTGAGATCACCATGGCCGATGGAGTATTGGTGAACACGTGGGAGAACCTGGAGCATCCAACGCTTGCTGCCATGCGCGATGACAAACTCTTGGGCCAGATAGTAAAGGCCCCCGTCTATCCCGTCGGCCCACTTACTAGACCCATAGAACCGACAGATTCGGAGAACGGTGTATTGGACTGGCTGGGCATGCAACCCAGTGAATCAGTAATTTACGTTTCGTTTGGAAGCGGTGGAACTCTATCAGCTAAGCAAACTACTGAGCTGGCTTGGGGTTTGGAGCTGAGCCGTCAAAACTTTGTCTGGGTGATACGGCCACCCATGGATGATGATGCAGCGGCGGCTCTTTTCACATCGGCGGACGGACGTGATGGCATCGCAGAGTACTTGCCTGATGGGTTCTTGGAGCGGACCAAAAAGGTTGGATGTGTGGTACCCATGTGGGCCCCGCAAGCCCAGATTTTGGGGCATCCATCGGTTGGAGGATTCATAACGCATTGCGGGTGGAATTCAACTCTGGAGAGTATGGTGAATGGGGTACCCATGATTGCATGGCCACTCTACGCCGAGCAAAAGATGAACGCAGTCATGTTAACCGAAGAGCTGGGTGTGGCCATCAGACCAAATGTGTTTCCCACCAAGGGAGTGGTGGGCAGGGAGGAGATAGCGACCATGGTGAGGAGGCTGATGGAGGACTCGGAAGGGAATGCAATAAGGGCTAAAGTTAAGGAATTGAAATACAGTGCCGAGAAGGCTTTAAGCAAGGGTGGTTCCTCCTACACTTCACTGTCTCATGTGGTCATGGATTGCCAGATGATGAGCCGATCATCCCAGCAACCCTTGGATAACAGAACCTCCACCAATCCTCCATCCCCGTCACTCAAAGGGATGCACCTGACCACTGTGCGTTGA 1509 0.5229 MEGTKPHAALLASPGMGHLIPVLELGKRLITHHGFQVTVFVVATEVSPAQSLLLQQATTPHLPNLVSLPVVNDSILVDPEASVLEQLLSMVRGSLPRLRSAISAMKVPPTVLIVDMFGLEAFKIANEFEMLKYVYITSNAWFLAFTAYLPVLDKLVETKCSDLQEPTRIPGCKPLWVEHVFEPVLDIKNEMYHAYMRMAVEITMADGVLVNTWENLEHPTLAAMRDDKLLGQIVKAPVYPVGPLTRPIEPTDSENGVLDWLGMQPSESVIYVSFGSGGTLSAKQTTELAWGLELSRQNFVWVIRPPMDDDAAAALFTSADGRDGIAEYLPDGFLERTKKVGCVVPMWAPQAQILGHPSVGGFITHCGWNSTLESMVNGVPMIAWPLYAEQKMNAVMLTEELGVAIRPNVFPTKGVVGREEIATMVRRLMEDSEGNAIRAKVKELKYSAEKALSKGGSSYTSLSHVVMDCQMMSRSSQQPLDNRTSTNPPSPSLKGMHLTTVR* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1086 502 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 465 - -
Vvi4g1086 502 FunFam Glycosyltransferase 7 246 - -
Vvi4g1086 502 FunFam Glycosyltransferase 255 453 - -
Vvi4g1086 502 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 2 475 - -
Vvi4g1086 502 MobiDBLite consensus disorder prediction 473 502 - -
Vvi4g1086 502 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 260 406 IPR002213 GO:0008194
Vvi4g1086 502 CDD GT1_Gtf-like 6 445 IPR002213 GO:0008194
Vvi4g1086 502 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Vvi4g1086 502 Gene3D Glycogen Phosphorylase B; 255 453 - -
Vvi4g1086 502 Gene3D Glycogen Phosphorylase B; 7 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1086 Vvi-Chr4 17705304 17706812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1086 1 472 Glycosyltransferase AT3G50740 50.420 1.31e-173 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1086 K12356 - vvi:100265092 1006.13