Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1084 ATGGGCACTGTTTGCTGGGCTATATCAACAGCTGCAGTGGGTGCAAGCCAGCAGTACATGCAAGTTGCATTCTGGAGAGCAGTAAATGGCTTTGGACTAGCAATTGTGATACCGGCACTCCAATCTTTCATAGCTGATAGCTATAAGGATAGTGTGAGGGGGACTGGATTTGGGTTTCTAAACCTTATCGGTTCTTTAGGGGGCATAGGAGGTGGAGTTTTAGCAACAGTTATGGCTGGTCAGCAATTCTGGGGCATACCTGGATGGCGTTGTGCCTTCATTATGATGGCAACACTGAGTTCATTAATTGGGTTTCTTGTTTTTCAGTATGTGGTTGACCCAAGAAGAACAATTAACATTACACATGATAGTGGTGAGAACTCTGACAGGAACAGTTTGTTAGATAAAAGCAAAGCCAGTTCAGTGTCAGTTTGGCTGGAGTCTTGGACAGCCACCAAAGCTGTTATAAAAGTGCAAACATTTCAGATCATTGTCTTGCAGGGTGTTGTTGGTTCACTACCATGGACTGCCATGGTTTTCTTCACCATGTGGTTTGAACTAATTGGTTTTGATCATAACAGCTCAGCAGCACTCCTCAGTGTTTTTGCCATTGGATGTGCAATGGGGTCCCTCCTTGGTGGATTAATAGCAGATCGAATGTCACAAATCTATCCTCACTCAGGCCGTATCATGTGTGCTCAGTTCAGTGCTCTCATGGGCATCCCATTTTCATGGTTCCTTCTTACAGTGATTCCACAGTCAGTGAGCAGCTGGTTCACTTTTGGCACCACCCTCTTTCTCATGGGGCTAACCATCAGCTGGAATGGCACAGCTGCAAATGCTCCCATGTTTGCGGAGGTTGTCCCTGTCAAGCACCGGACCATGATCTATGCATTTGATCGTGCTTTTGAAGGATCCTTCTCTTCTTTTGCCGCCCCCATGGTTGGAATTCTTTCAGAGAAAATGTTTGGCTATGATCCAAAGACTGTTGATCCAGTTTCAGGGTCTGCACAGGCAGCCTTCGCCTTGTCAAGAGGTCTTCTTTCAATGATGGCAGTTCCATTCGGTTTATGTTGCTTGTTTTACACACCGTTGTATGTGGTTTTCAGGCGGGACCGAGAAAATGCTAGAATTGCTAGTTTGAAAGAGGAAGAGATGATGTGA 1164 0.4553 MGTVCWAISTAAVGASQQYMQVAFWRAVNGFGLAIVIPALQSFIADSYKDSVRGTGFGFLNLIGSLGGIGGGVLATVMAGQQFWGIPGWRCAFIMMATLSSLIGFLVFQYVVDPRRTINITHDSGENSDRNSLLDKSKASSVSVWLESWTATKAVIKVQTFQIIVLQGVVGSLPWTAMVFFTMWFELIGFDHNSSAALLSVFAIGCAMGSLLGGLIADRMSQIYPHSGRIMCAQFSALMGIPFSWFLLTVIPQSVSSWFTFGTTLFLMGLTISWNGTAANAPMFAEVVPVKHRTMIYAFDRAFEGSFSSFAAPMVGILSEKMFGYDPKTVDPVSGSAQAAFALSRGLLSMMAVPFGLCCLFYTPLYVVFRRDRENARIASLKEEEMM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1084 387 Pfam Major Facilitator Superfamily 2 275 IPR011701 GO:0022857|GO:0055085
Vvi4g1084 387 SUPERFAMILY MFS general substrate transporter 2 376 IPR036259 -
Vvi4g1084 387 PANTHER SPINSTER 1 376 IPR044770 -
Vvi4g1084 387 Gene3D MFS general substrate transporter like domains 156 384 IPR036259 -
Vvi4g1084 387 Gene3D MFS general substrate transporter like domains 1 122 IPR036259 -
Vvi4g1084 387 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 374 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1084 Vvi-Chr4 17678808 17681168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1084 - - vvi:100254794 740.339