Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1081 ATGCACGACTTTAAAACGCCAGATGAGGCAGTTTCATCTGTTATTTTCCACAACCCATCTGAGGCTAGGGCTGCCGGTCGGATAATCACTAAGCTCTCTATCCCCAGAGCAGTTATGGAGAGTTCAAAGCCTCATGCAGCACTACTATCCAGCCCCGGTTTGGGTCACCTCATCCCCATGCTGGAGCTCGGGAAACGGCTTGTAACTCATCATGGATTTGACGTTACTGTCTTCACCATATCAGCTTCTACATCACCTGCAGAGTCCCAACTTCTCCAGTCGATTGCCAGTCCCCAGCTCCTAAACATGGTTGAACTCCCCCCAGTGGACATGTCCAACCTGGTTGACGCTGATGCTAAGCTAGTTACACGCATTGCTGCGATTATGAGGGAGATAATACCGAGATTCCGGACCGCAATCTCCGGAATGAAGGTTCGACCCACAGTCCTCATCCTGGACTTCTTTGGATTTGAAGCCCTCCATATCTTAGAATTCGACATGCCAAAGTACATTTACTTCCCTGGGACTGCATGGTTTCTGTCATTATCGGTATATGCTCCAATTTTAGATATGGAGGTGGAAGGGGAGTATGTAGATAGAACAGAACCGCTTAGTCTTCCCGGATGCAAACCGGTACGGCCAGAAGATGTGGTTGACCCGATGCTGGACCGGACGAATCAGGAGTACCTTCAGTACGTGCGCATGGGGGCCGGGCTGTCTAAGTGTGACGGAATTTTGTTGAACATGTGGGAGGATCTGGAACCCACCACGCTCAGAGCACTTAGAGATGAAGAAGCAATGGCGCCTTTTGTAAAGGTACCGATTTACCCTATTGGTCCTCTGACAAGATGTCCAGGAGGGGTAGCTCCGAGGGAGCTGTTGGATTGGCTAGACCTGCAACCCACTGAGTCAGTTATTTACGTCTCTTTTGGGAGTGGTGGAACGATCACAATCGAGCAACTCACTGAGCTGGCTTGGGGATTGGAACTGAGCCAGCACAGATTTATCTGGGTGGTGCGGCCGCCCATCCAAAATAATTTATATGGGTCCTATTTTACGTTAGGAAACGGAGGTGATGATCCAATACGTTACTTGCCAGTTGGGTTCCTAGGCCGTACCAAAACTATTGGAATTGTGATCCCAAACTGGGCTCCTCAAGTGGATATCCTCCGCCATCCATCGGTCGGAGGATTTTTATCACACTGCGGGTGGAGTTCCACGCTAGAGAGTATAGTCAACGCTGTGCCAATGATTGCGTGGCCTCTTTTCGCGGAGCAAAGATTGAATGCGACGATAGTGACGGAGGACCTCGGAATTGCTGTCAGACCGGAGGTGTTGCCGACTAAGAGGGTGGTGAGGAGAGAGGAGATAGAGAAGATGGTTAGGAGGGTGATGGTTGACAAAGAAATGAGAAATAGAGTAAAAGAACTAAAGAAGAGCGGAGAGAGCGCTTTAAGCAAGGGTGCGTCCTCTTATAACTCACTCTCTCTAATAGCCAAAGACTGA 1506 0.4954 MHDFKTPDEAVSSVIFHNPSEARAAGRIITKLSIPRAVMESSKPHAALLSSPGLGHLIPMLELGKRLVTHHGFDVTVFTISASTSPAESQLLQSIASPQLLNMVELPPVDMSNLVDADAKLVTRIAAIMREIIPRFRTAISGMKVRPTVLILDFFGFEALHILEFDMPKYIYFPGTAWFLSLSVYAPILDMEVEGEYVDRTEPLSLPGCKPVRPEDVVDPMLDRTNQEYLQYVRMGAGLSKCDGILLNMWEDLEPTTLRALRDEEAMAPFVKVPIYPIGPLTRCPGGVAPRELLDWLDLQPTESVIYVSFGSGGTITIEQLTELAWGLELSQHRFIWVVRPPIQNNLYGSYFTLGNGGDDPIRYLPVGFLGRTKTIGIVIPNWAPQVDILRHPSVGGFLSHCGWSSTLESIVNAVPMIAWPLFAEQRLNATIVTEDLGIAVRPEVLPTKRVVRREEIEKMVRRVMVDKEMRNRVKELKKSGESALSKGASSYNSLSLIAKD* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1081 501 CDD GT1_Gtf-like 44 482 IPR002213 GO:0008194
Vvi4g1081 501 FunFam Glycosyltransferase 45 283 - -
Vvi4g1081 501 ProSitePatterns UDP-glycosyltransferases signature. 383 426 IPR035595 -
Vvi4g1081 501 Gene3D Glycogen Phosphorylase B; 45 491 - -
Vvi4g1081 501 FunFam Glycosyltransferase 291 486 - -
Vvi4g1081 501 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 292 474 IPR002213 GO:0008194
Vvi4g1081 501 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 39 500 - -
Vvi4g1081 501 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 43 495 - -
Vvi4g1081 501 Gene3D Glycogen Phosphorylase B; 291 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1081 Vvi-Chr4 17638953 17640582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1081 39 501 Glycosyltransferase AT3G50740 46.737 6.50e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1081 K12356 - vvi:100266832 996.112