Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1080 ATGGGAGTTATTGTGGACGATACCGCTTGGGTCAAGAGTTTGGTTTTCGACAAGAAGATCAGTCACTCGGCTAGTAGGCCAACCGGGGTGGAGAATGCTAAGATTGTAGTGATCCAGTTTCAGATTTTGACTCCAAAGACTGATATTGAGCAGAGTATAGTGATTTCCGATTATACCCAAATGGACCGGATATTGAAAGAAGAAAGAAACTATATTCTGGGTATGATTAGGAAGATTAAGGGTATTGGCTGTAACGTTCTATTGATTCAGAAGAGTATACATAGAGATGAAATGACGGATTTGTCGTTGAATTGTCTTACTCAAGCAAAGATTTTGGTGATAAAGGATGTGGAGTGTGTTGAAATTGAGTTCATTACAAAGACTTTGAATTGTTTGCCAGTTGCAAACATTGAGCATTTCAGGGCAAAGAAGTTGGGTTTTGCATATTGA 450 0.3889 MGVIVDDTAWVKSLVFDKKISHSASRPTGVENAKIVVIQFQILTPKTDIEQSIVISDYTQMDRILKEERNYILGMIRKIKGIGCNVLLIQKSIHRDEMTDLSLNCLTQAKILVIKDVECVEIEFITKTLNCLPVANIEHFRAKKLGFAY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1080 149 Gene3D GroEL 14 149 IPR027409 -
Vvi4g1080 149 SUPERFAMILY GroEL apical domain-like 7 148 IPR027409 -
Vvi4g1080 149 PANTHER CHAPERONIN 4 148 IPR017998 GO:0140662
Vvi4g1080 149 Pfam TCP-1/cpn60 chaperonin family 5 148 IPR002423 GO:0005524
Vvi4g1080 149 FunFam T-complex protein 1 subunit delta 12 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1080 K09496 - vvi:104879160 294.664