Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1075 ATGGGTGGTATATTCAGCAAGAAGAGAGATGATGAAGCCCCATCAGTACGTATCAATTCACAGTACGCGGCTGATCTGAGCTCGTATGAGGCAGCATGCCGACTCGATCCGGACTTGCAGTCCTTCGATACCAACATTCAGGAGCGCACTAATCGTGTAATCAATACGCTTGCTGTGGGAGTTGAGGTTGGAGTCGAGGTGCGATCTCTATCTTTCGATTCGCTCAGAGAGGTCACCGATTGCTTACTTGAAATGAATCAAGAAGTAGTCAAAGTAATTCTGGAGTGTAAGAAAGATATTTGGAAGTGTAAAGAGCTTTTTGATCTGGTTGAGGAATATTTTGATAACAGTCTCCGGACTTTAGAGTTCTGTACTGTACTTGACAAATGCCTGAAGCGAGCTCGGGATTCTCAATTGATAGTTCAGGTCGCATTACAGCGTTTTGAGGAAGAGGAAAAGGATGGAGTTGGCGAGAATAAGCATTTGAAGACATTACAGGAATTGAGGAATTTTAAGGCTGCAGGCAAGCCATTTTCCGACGATTTTTTTGAGCTGTTTCAATCAGTTTATAGTGGACAAAAATTGATGTTAGAGAAATTGCGACAGCGCAAACGGAAGCTTGATAAGAAGTTGAAATCATTGCAAGGATGGAGGAAGGTTTCAACTATAGTATTTGTTTCTGCATTTGTCTCAGTTTTGATATTCTCAGTGGTGGCGGCTGCCATTGCAGCACCACCCGTTGTGACTGCTTTGGCAGGCGCTTTGGCTGTTCCAATAGGCTCAATGGGTAAATGGTTTGATTCCATATGGAAGAAGTATGAGAAGGAGCTGAAAGGACGGAGGGAGATAATTAGCTCAATGCAGGTTGGCTCTCTTATTGCAATCAAGGACTTGGAGGACATTCGGGTTCTTGTCGAAAAATTGGAAATTGATATTGAGTCACTATTGCAAAATGCTGATTTTGCTATTCAGGAAGAGGATGCAGTAAAACTTGTAATAGAAGAGATCAAGAAGAAACTGCATGGGTTTATGGAAACCATTGAAATGTTGGGTCAAAATACTGATAAGTGTAGCAGGGATATAAGGAGAGCAAGAACAGTGATTTTGCAGAGGATAATCAGACATCCCAACAGCAACAACTGA 1143 0.4226 MGGIFSKKRDDEAPSVRINSQYAADLSSYEAACRLDPDLQSFDTNIQERTNRVINTLAVGVEVGVEVRSLSFDSLREVTDCLLEMNQEVVKVILECKKDIWKCKELFDLVEEYFDNSLRTLEFCTVLDKCLKRARDSQLIVQVALQRFEEEEKDGVGENKHLKTLQELRNFKAAGKPFSDDFFELFQSVYSGQKLMLEKLRQRKRKLDKKLKSLQGWRKVSTIVFVSAFVSVLIFSVVAAAIAAPPVVTALAGALAVPIGSMGKWFDSIWKKYEKELKGRREIISSMQVGSLIAIKDLEDIRVLVEKLEIDIESLLQNADFAIQEEDAVKLVIEEIKKKLHGFMETIEMLGQNTDKCSRDIRRARTVILQRIIRHPNSNN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1075 380 Coils Coil 190 217 - -
Vvi4g1075 380 PANTHER UPF0496 PROTEIN 3-RELATED 15 374 IPR007749 -
Vvi4g1075 380 Pfam Protein of unknown function (DUF677) 39 372 IPR007749 -
Vvi4g1075 380 Coils Coil 298 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1075 Vvi-Chr4 17592401 17593543 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1075 - - vvi:100256393 675.241