Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1074 ATGCTGGAAGCAGTGGTGAATTCCAATTCCATGAATGGAGTTGATGATGGTGGGATTCCACAGCTGCATGGCAATGGAGAGAGCAGTGAAGAGGGTCTCACGGTACTTCCCCGTCACACCAAAGTTATTGTCACCGGCAACAACCGGACCAAGTCGGTACTTGTCGGCCTTCAAGGCGTCGTCAAGAAAGCCGTTGGGCTTGGCGGCTGGCATTGGCTGGTCCTTACAAATGGAATTGAAGTGAAACTACAAAGGAATGCTCTTAGTGTTATTGAAGCTCCGACCGGCCATGAGGATGATGATGACCTTGAATGTGAGAACATACACTGGAACGATTCTGATGTGGGAGAGTTTAGTCCACCTGGTTCTGATGATACTCGGAAGTTTTATAGAGCAAGGAATCGGCCCCATAAATCAGTTAGATCACAGAGGGCTATGAGCAGGCCTCTTTCTGATGATTCACAGTCTAAAGGATCTTATTCACCTACCCAGAGTTCAACGAAAGTTGACTTCAGCAAACTAGAAAAAACAGCACTACTGAGATATTGGAGACACTTTAACCTAGTGGATTCTATACCAAACCCATCAAAAGAGCAGCTAATTGATGTTGTTCAAAGGCATTTCATGTCACAGCAATTGGATGAATTGCAGGTGATTATTGGTTTTGCTCAGGCTGCAAAGAGGCTGAAAGCAGTTTGCAATTGA 705 0.4539 MLEAVVNSNSMNGVDDGGIPQLHGNGESSEEGLTVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGHEDDDDLECENIHWNDSDVGEFSPPGSDDTRKFYRARNRPHKSVRSQRAMSRPLSDDSQSKGSYSPTQSSTKVDFSKLEKTALLRYWRHFNLVDSIPNPSKEQLIDVVQRHFMSQQLDELQVIIGFAQAAKRLKAVCN* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1074 234 MobiDBLite consensus disorder prediction 111 167 - -
Vvi4g1074 234 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 175 227 IPR025718 GO:0005515
Vvi4g1074 234 PANTHER SAP30 27 230 IPR024145 -
Vvi4g1074 234 MobiDBLite consensus disorder prediction 144 167 - -
Vvi4g1074 234 Gene3D - 150 234 IPR038291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1074 Vvi-Chr4 17584995 17588190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1074 - - vvi:100251235 474.552