Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1071 ATGATCCAGAGATTGGTCTATTGGCTATCGGAGCACCCAGCAATCATCAAATTCCGGTGGAGCCCCACCCAGTCATGGGGCTCCACTTGGTCTTTTCTCCTCACCTCCATGGCCTTCTACCTCACTCTGTCTCTCGTCCTCCACCTCATCTTGGTCCTCTTCCGCCGCCGCAGACCCGTGCCTCTGGGCCCCATTCCCGCCGTCTACAGCCTCTCCATGGCCTTGATTTCAGCCGTCATCTTCACCGGGACCCTTTTCTCCGCCGCCGCCGAGATCCGGGACACCCGGTGGTTCTGGCGGAGGTCCAAGACCCCATTACAATGGCTGCTGTGCTTCCCTCTGGGGACACGGCCATCGGGGCGGGCCTTCTTCTGGTCATACGCCTACTACCTCTCTCGCTTCCTCCACATGTTCCGCACGTACTTCACCATATTAGAACATCGTAAGCTGGGTTTACTCAACATTTTCAATAACTTAATGCTGCTATGCATGTCGTTTCTGTGGCTTGAATTCTCACAGTCATTCCAATTAGTGGAAATCATGTTGGCCACCCTGGTGTACTCTGTTGTATACGGCTACAAGTTCTGGACGGCAATCGGGCTGCCCAGTACATGCTTCCCATTTGTGTTGAGCTGCCAGATGGTTTTACTGGGCTCTAATGTCCTCTGCCATGTGGGGGTCCTTTTACTTCACTTGAGGAAAGGTGGCTGTAATGGAATTGGGGCCTGGATCTTCAATTCTGTGCTTAATGCTGCAATTTTGCTTCTTTTTGTTAACTCCTTTGTCAGGAAGATGCATTTGAGGAGGAGACAGGTTGAAGATGATGATTCAGTACTCCACTCCTGCTCTGCCTCGGAGGAGACGAAGGTGGAGAACAGGATTAAAGATAAGAATCTTTGA 900 0.5178 MIQRLVYWLSEHPAIIKFRWSPTQSWGSTWSFLLTSMAFYLTLSLVLHLILVLFRRRRPVPLGPIPAVYSLSMALISAVIFTGTLFSAAAEIRDTRWFWRRSKTPLQWLLCFPLGTRPSGRAFFWSYAYYLSRFLHMFRTYFTILEHRKLGLLNIFNNLMLLCMSFLWLEFSQSFQLVEIMLATLVYSVVYGYKFWTAIGLPSTCFPFVLSCQMVLLGSNVLCHVGVLLLHLRKGGCNGIGAWIFNSVLNAAILLLFVNSFVRKMHLRRRQVEDDDSVLHSCSASEETKVENRIKDKNL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1071 299 Pfam GNS1/SUR4 family 28 269 IPR002076 GO:0009922|GO:0016020
Vvi4g1071 299 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 8 265 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1071 Vvi-Chr4 17567875 17568774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1071 7 276 Acyl Lipid Metabolism Gene Families AT1G75000 58.333 5.06e-115 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1071 - - vvi:100246092 582.793