Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1065 ATGAAAATTGTGGATACAGTGGCCATAGCCCATGCTCTCGCACTTGCTGCTTACGCTGATGCCGCTTCTGCTTCCCAATCTTCTTCCCAGCAAACATTCTCATCCTCCACGACTGGGGGTCGCGCCGCTTTTCAGTGGGGTGGAACCATATCTGCCACATTTTTGTTAATCTTGAATCAAGTAGGGCGGAGATCATCCATCCAAAGTTCCCTTTTGGTCCTCTTTCTTCTAACGAGTTTCCCTGCAGTGCTGTTTAACATTGTTAGGGGGCAAATTGGACGTTGGTTTGCATTTCTTGCCGTTGCAGCAAATCTCTTCTTCCCTCGGAAGTTTCCAGTTGCTGGTTTTATCCTATTGGTGGCCACTCCTGACTGGCTGGCTAATGGACTGCGTGATAGTATTGTGGGTGGTGTGTTTTGTCTCCTACTGGGAGTGTGTCTTGTGATAACAGAGATTCGAGGAATTGGAGGATGCAGCAGATGTGAATGTAATTTACTCTGCTTTGGTTTTTCTGTTTGTATCTCTTTCCTCTTCTTCTTTACAATATTGTATTTATGTTTGGGATCTTGGTAG 573 0.4555 MKIVDTVAIAHALALAAYADAASASQSSSQQTFSSSTTGGRAAFQWGGTISATFLLILNQVGRRSSIQSSLLVLFLLTSFPAVLFNIVRGQIGRWFAFLAVAANLFFPRKFPVAGFILLVATPDWLANGLRDSIVGGVFCLLLGVCLVITEIRGIGGCSRCECNLLCFGFSVCISFLFFFTILYLCLGSW* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1065 190 Pfam Cold acclimation protein WCOR413 29 160 IPR008892 GO:0016020
Vvi4g1065 190 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 15 187 IPR008892 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1065 - - vvi:100247855 309.301