Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1063 ATGATGCCAAAAGTTGACGTTTTTGCTTTTGGGGTTGTTCTATTGGAGTTGCTTTCAGGGAAGAAAGCCATGCAAATGAGAGCCAATGGTGAGATTGTTATGCTGTGGAAGGATATAAGGGAGATCTTAGAAGTCGAAGACAAGAGAGAAGACAGGATAAGGAGGTGGATGGATCCAACATTGGAGAACTTTTATCCCTTTGATGGTGCTCTCAACTTGGCAGGGTTGGCAAGGTCATGCACACAGGAGAAGTCTTCAGCAAGGCCAAGCATGGCAGAAATCGCCTTTAATCTCTCTGTCCTCAGTCAGACATCTTCTGAAACCTTGGAAAGGTCCTGGACTCAGGGGTTTGAACCAGAAGAAACAATACAAATAATCAATCCGGTCATAGCTCGTTGA 399 0.4461 MMPKVDVFAFGVVLLELLSGKKAMQMRANGEIVMLWKDIREILEVEDKREDRIRRWMDPTLENFYPFDGALNLAGLARSCTQEKSSARPSMAEIAFNLSVLSQTSSETLERSWTQGFEPEETIQIINPVIAR* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1063 132 SUPERFAMILY Protein kinase-like (PK-like) 3 96 IPR011009 -
Vvi4g1063 132 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Vvi4g1063 132 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1063 Vvi-Chr4 17482667 17483065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1063 4 127 Receptor kinase-like Gene Family AT3G21630 38.583 1.27e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1063 - - vvi:100259809 262.307