Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1049 ATGATCGGATGCTGTAGTTTTTGCCCATGTTTCGGAATCTCCGGCGACGCCGACGACGATCTGGGCCGCTCCAATCTAGACCCGGTGCTGCTAATCTCCGGCATCGGTGGCTCCATTCTCCATTCCAAGAGGAGGCGGCGCGGGTTCCAGACCCGGGTTTGGGTCCGGATCTTCTTGGCTGATTTGGAGTTCAAGAAGAAGCTCTGGTCTATCTACAATCCGAAAACAGGTTATACAGAAGCACTAGATGATGACTCAGAAATTCTGGTCCCTGATGATGATCATGGACTTTATGCGATTGATATTTTAGATCCCTCTGTGCTGACAAAATGTTTACATCTGAAGGAGGTATATTATTTTCATGATATGATTAATATGCTCCTTCGATGTGGGTACAAGAAGGGAATCACATTGTTTGGATATGGTTATGACTTCCGGCAAAGCAATAGAATTGACAAAGCGATGGAAGGCCTAAAAATAAAGTTGCAAACTGCATACAAAGCTTCTGGGGGTAGAAAAGTTAATATAATTTCACATTCAATGGGTGGATTGCTAGTGTCCTGTTTCATGTCACTCTACAATGATGTATTTTCCAAATATGTAAATAAGTGGATCTGCATTGGGTGTCCTTTTCAAGGTGCACCAGGATGCATCAATGGTTCTCTTTTGACTGGATTGCAATTTGTTGATGGCTTGGAAAGCTTCTTTTTTGTATTGAGGTGGACAATGCATCAACTGTTGGTCGAGAGCCCATCAATATATGAAATGATGGCAAATCCAGAATTCCAGTGGAAAAAGCAACCTGAGATTCAGGTTTGGAGAAAGCAATTCAAGGATAAGAAAACTTCTTCAGTCGTGCTGGAAACATATGGCCCAACTGAAAGCATCACTCTGTTTGAAGAAGCTTTGAGAGATAATGAGGTGAGTTATGATGGGAGAACAATAGCTGTGCCATTCAACTTTTCTATTCTTCAATGGGCTACTGGTACTCGTCAAGTTCTCAATAATGCTCAACTACCAACTGGAGTCTCCTTTTACAACATTTATGGGACATGTTTTGACACACCATTTGATGTTTGCTATGGCTCGGAAACTTCTCCAATCAATGACTTGTCTGACTTATGCCACACAATTCCTGAGTATTCTTATGTGGATGGAGATGAAACTGTTCCCGCTGAATCAGCAAAGGCAGATGGATTTGCAGCAATAGCAAGAGTAGGAGTTGCTGCTCGTCATCGGGATCTCTTACGGGACAAAAAGGTATTCCATCTCATCCAGAAGTGGTTAGGAGTGAGCCCAAAACATTCAAGAACTTCCAGAGTGACGAATATTTCAGCAAATTAA 1344 0.4241 MIGCCSFCPCFGISGDADDDLGRSNLDPVLLISGIGGSILHSKRRRRGFQTRVWVRIFLADLEFKKKLWSIYNPKTGYTEALDDDSEILVPDDDHGLYAIDILDPSVLTKCLHLKEVYYFHDMINMLLRCGYKKGITLFGYGYDFRQSNRIDKAMEGLKIKLQTAYKASGGRKVNIISHSMGGLLVSCFMSLYNDVFSKYVNKWICIGCPFQGAPGCINGSLLTGLQFVDGLESFFFVLRWTMHQLLVESPSIYEMMANPEFQWKKQPEIQVWRKQFKDKKTSSVVLETYGPTESITLFEEALRDNEVSYDGRTIAVPFNFSILQWATGTRQVLNNAQLPTGVSFYNIYGTCFDTPFDVCYGSETSPINDLSDLCHTIPEYSYVDGDETVPAESAKADGFAAIARVGVAARHRDLLRDKKVFHLIQKWLGVSPKHSRTSRVTNISAN* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1049 447 SUPERFAMILY alpha/beta-Hydrolases 24 418 IPR029058 -
Vvi4g1049 447 Gene3D alpha/beta hydrolase 84 430 IPR029058 -
Vvi4g1049 447 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 17 435 - -
Vvi4g1049 447 Pfam Lecithin:cholesterol acyltransferase 71 395 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1049 Vvi-Chr4 17362020 17370254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1049 8 443 Acyl Lipid Metabolism Gene Families AT3G03310 69.005 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1049 K22389 - vvi:100263328 925.235