Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1041 ATGGCGGCGAGGAACGCTCTTCTGAAGTACCTGAGAGTGGAAGCTCGACGCCTGCCGCAAAACCCTAATGTTCCTTTCCAACTATCTTTCAATTTGATACGACGCCATTTCTCCGAGGAGATCAGAGGAACTTTCCTCGATAAATCTGAGGTCACGGATCGAGTAATCTCCGTCGTCAAGAACTTCCAGAAAGTGGATCCTTCTAAGGTTACACCAACCGCTAATTTCCAGACTGATCTTGGGTTAGATAGCCTAGACGCTGTGGAGGTTGTGATGGCACTTGAAGAAGAGTTTGGGTTTGAGATCCCTGACAATGAAGCAGACAAGATCAACACCATCAACGTCGCTGTTGACTTCATCTCTTCTCACCCTCAGGCCAAATAA 384 0.474 MAARNALLKYLRVEARRLPQNPNVPFQLSFNLIRRHFSEEIRGTFLDKSEVTDRVISVVKNFQKVDPSKVTPTANFQTDLGLDSLDAVEVVMALEEEFGFEIPDNEADKINTINVAVDFISSHPQAK* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1041 127 Pfam Phosphopantetheine attachment site 54 119 IPR009081 -
Vvi4g1041 127 Hamap Acyl carrier protein [acpP]. 50 124 IPR003231 GO:0006633
Vvi4g1041 127 FunFam Acyl carrier protein 38 126 - -
Vvi4g1041 127 NCBIfam acyl carrier protein 49 123 IPR003231 GO:0006633
Vvi4g1041 127 Gene3D - 38 126 IPR036736 -
Vvi4g1041 127 SUPERFAMILY ACP-like 47 123 IPR036736 -
Vvi4g1041 127 ProSiteProfiles Carrier protein (CP) domain profile. 49 124 IPR009081 -
Vvi4g1041 127 ProSitePatterns Phosphopantetheine attachment site. 79 94 IPR006162 -
Vvi4g1041 127 PANTHER ACYL CARRIER PROTEIN 1 125 IPR003231 GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1041 Vvi-Chr4 17250608 17259009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1041 1 127 Acyl Lipid Metabolism Gene Families AT1G65290 75.591 4.65e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1041 K03955 - vvi:100854213 250.366