Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1038 ATGGATATGGGGCCATGTCCGAAGGTGCACTCCTTGCAGCTAAGGAAAGAATATGAAGAAGCCAAAGCAAAAGGTGTCCATAATTATGACAGGGACTTGGAGGATGTTATAGATAGGCTCATTGTTGAGTGTGATAGAAAAATTGCTAGAGCTCTTAAGCGTCTTGAGGATGAGGATGCTAAAGCTGCTATAGCAATTTCAGTCTCTGAGGTTACTCAGACACCTGAGGTGCTTGAGTTGTCGAAGCAGATTAAGGAGAAGTTGAAGGAAGCTGATCAATTTGATCTTGAAGGCAAGACTGATAGCAAGATTCGAGCTCTAGAAGTAGTAGAAGAACTCAGAACGAAAAGAGCAGACAAGCAGTCTATGCTTCTTCTGGATGCCTTCAACAAGGATAGAGCGTCTTTACCCCAACCCCTTCCAAACCCGCCCCCATTGGCACCCTTGCCAGTACTTGCTCCTGATCCTCGTACACAGGAAATGATAAATGAGAAGCTGAAAAAGGCAGAGGATCTTGGCGAGCAAGGAATGATAGACGAGGCACAGAAAGCATTGGAAGAGGCTGAAGCACTTAAGAAGCTGGCCCCTAGGCAGGAGCCTGTTCTTGATTCTTCCAAGTACACTGCTGCTGATGTGCGCATTACTGATCAGAAGCTACGCGTATGTGACATTTGTGGAGCATTTTTGAGCGTTTATGATAGTGACCGTCGCTTAGCAGATCATTTTGGAGGAAAGCTTCATTTGGGCTATATGCAAATCCGTGAAAAGCTGGCAGAGCTTCAGGTGCTGGTATAA 795 0.4566 MDMGPCPKVHSLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSEVTQTPEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPPPLAPLPVLAPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAEALKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQVLV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1038 264 Coils Coil 178 198 - -
Vvi4g1038 264 Pfam LUC7 N_terminus 1 121 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vvi4g1038 264 Pfam LUC7 N_terminus 158 261 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vvi4g1038 264 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 158 261 IPR004882 GO:0003729|GO:0005685|GO:0006376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1038 - - vvi:100254714 466.463