Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1036 ATGGCTACGAAAGTTCCCATTGGTGCTGGGTTAAGCTTGGCTTCACCGCCATGTGCTTCCAACGTCCGTTCACTTGTCCTCAAATCTGCCTTCTTTGGTCATGTGGGAGCTCTAAAAGTTAGAGGCATACGAATAGCTCGTTCCAGTACATACAGATGTAATGGTCATGGAGGGGGTGCTCTTGGTACCCAGATGAACCTTTTCGATCGATTTGCTAGAGTTGTCAAGTCATATGCAAATGCGGTTTTAAGCTCCTTTGAAGACCCTGAGAAGATTCTAGAACAAACTGTGCTTGAAATGAATGATGACTTAACGAAGATGCGTCAAGCTACAGCACAAGTTCTGGCATCACAAAAGCAGTTGGAAAACAGATATAAAGCTGCACAACAGGCTTCTGAAGATTGGTACAAAAGGGCACAACTTGCTCTTGGAAAGGGAGATGAGGATCTTGCCCGTGAAGCTCTTAAGCGGCGTAAATCTTATGCTGATAATGCAAGTGCTTTGAAGGCTCAGCTTGATCAGCAGAAGACTGTCGTTGAAAATCTTGTCTCTAATACACGGCTTTTGGAAAGCAAGATACAGGAGGCAAAATCAAAGAAAGACACTCTCAAAGCACGTGCTCAGTCTGCAAAGACTGCAAGCAAAGTGAGTGAGATGCTGGGGAATGTAAATACAAGCAGTGCTCTTTCAGCTTTTGAAAAGATGGAGGAAAAAGTGTTAGCCATGGAGTCTCAAGCTGAGGCACTCAATCAGTTAACCACTGATGATCTGGAAGGAAAGTTTGCATTGCTGGAGAGTTCTTCAGTTGATGATGATCTTGCAAGCTTGAAGAAGGAACTATCTGGGAGCTCAAAGAAAGGAGAGCTGCCACCTGGGAGAACCGCGGTTGCCTCAAACACAGCATTCCCTTTCCGAGACTCTGAGATTGAAAAGGAGCTGAATGAACTGAGGAGAAAAGCAAGTGAGTTCTAG 972 0.4486 MATKVPIGAGLSLASPPCASNVRSLVLKSAFFGHVGALKVRGIRIARSSTYRCNGHGGGALGTQMNLFDRFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKQLENRYKAAQQASEDWYKRAQLALGKGDEDLAREALKRRKSYADNASALKAQLDQQKTVVENLVSNTRLLESKIQEAKSKKDTLKARAQSAKTASKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALNQLTTDDLEGKFALLESSSVDDDLASLKKELSGSSKKGELPPGRTAVASNTAFPFRDSEIEKELNELRRKASEF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1036 323 Coils Coil 118 138 - -
Vvi4g1036 323 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 1 323 IPR007157 -
Vvi4g1036 323 Pfam PspA/IM30 family 66 279 IPR007157 -
Vvi4g1036 323 Coils Coil 151 213 - -
Vvi4g1036 323 MobiDBLite consensus disorder prediction 279 301 - -
Vvi4g1036 323 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1036 Vvi-Chr4 17179632 17199910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1036 K03969 - vvi:100249595 603.979