Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1032 ATGGCTCTCCGCCTCTCCCTCTCTCCTCCTCCTATTCGCTCCTCCGCCTCCCCATCGTGGGCCGCGCCGCACTCGATCGCGATCTCCTGCTCCTCTTCGTCGTCGGTTGGGGTGTCTGTCCCGACGCAGGAGAAGAGGAGGGCTAGGGTTGTGGTGCGGTCGTCGAGCATCGACACTGCCGAGGCGGTCGTGGGACAGGTGACCGAGGTGAATAAGGACACATTCTGGCCTATAGTCAAGGCCGCCGGGGACAAGGCCGTCGTTCTCGATATGTACACTCAGTGGTGTGGTCCCTGCAAAGTGATGGCTCCAAAATTCCAAGAATTGTCTGGGAAGTATCTTGACGTTGTCTTTCTAAAGCTGGACTGCAACCAAGACAACAAGACTTTGGCAAAGGAGCTGGGAATCAGGGTGGTTCCTACCTTCAAGATCCTGAAGGACAGCAAGATCGTAAAGGAAGTTACAGGGGCCAAATTAGACGATTTGGTTGTCGCCATAGAGACTGTTAGATCAAGTTAG 519 0.5491 MALRLSLSPPPIRSSASPSWAAPHSIAISCSSSSSVGVSVPTQEKRRARVVVRSSSIDTAEAVVGQVTEVNKDTFWPIVKAAGDKAVVLDMYTQWCGPCKVMAPKFQELSGKYLDVVFLKLDCNQDNKTLAKELGIRVVPTFKILKDSKIVKEVTGAKLDDLVVAIETVRSS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1032 172 CDD TRX_family 73 157 - -
Vvi4g1032 172 PANTHER THIOREDOXIN-LIKE PROTEIN 1 66 167 - -
Vvi4g1032 172 Gene3D Glutaredoxin 50 171 - -
Vvi4g1032 172 SUPERFAMILY Thioredoxin-like 60 168 IPR036249 -
Vvi4g1032 172 PRINTS Thioredoxin family signature 87 95 - -
Vvi4g1032 172 PRINTS Thioredoxin family signature 135 146 - -
Vvi4g1032 172 PRINTS Thioredoxin family signature 95 104 - -
Vvi4g1032 172 ProSitePatterns Thioredoxin family active site. 88 106 IPR017937 -
Vvi4g1032 172 Pfam Thioredoxin 67 166 IPR013766 -
Vvi4g1032 172 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Vvi4g1032 172 ProSiteProfiles Thioredoxin domain profile. 48 171 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1032 Vvi-Chr4 17127847 17132102 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1032 K03671 - vvi:100261565 273.478