Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1023 ATGATGAGAGAGTGTAGAGCAATATTCCTTGTGGTTCCTTTGCTTTGCTTCCTATCCTCACGTGAACCAAACACCTTGGTTTGCAATGAGAAGCAGAAAAATGCCCTGCTTAGCTTCAAACAAGCTCTCTCAGACCCCGCAAACCAACTCCGACTCTCATCTTGGACTGCAGAGGAAGATTGCCGTGGGTGGATAGGAGTTCACTGCCATAGCATCAATGGTCAAGTCATGGAGCTAATTAGGTGTCCCATGATTGAAATGATTCCCAGAAAGATGAAGGTATGTGAGAGATGTAAGATTTACATACCCAAGCGACGGATTCATGCTATCAATTTCACAATCGGACAAGTAGAGATAGCATAG 363 0.4435 MMRECRAIFLVVPLLCFLSSREPNTLVCNEKQKNALLSFKQALSDPANQLRLSSWTAEEDCRGWIGVHCHSINGQVMELIRCPMIEMIPRKMKVCERCKIYIPKRRIHAINFTIGQVEIA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1023 120 Gene3D Ribonuclease Inhibitor 26 90 IPR032675 -
Vvi4g1023 120 Coils Coil 110 120 - -
Vvi4g1023 120 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1023 Vvi-Chr4 16872863 16873225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1023 23 79 Receptor kinase-like Gene Family AT3G05370 38.095 5.56e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1023 - - vri:117910341 91.6633