Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1018 ATGGCATTGGTCACAACCGCTGAAGTTTGTGATGCAAACCCACAGCTAATTGTTAGTGGAGAGCTCCGGGCACTGCAGCCCGTGTTCCAGATTTATGGTCGGCGCCCAGTCTTCTCTGGACCAATTGTTACCCTCAAAGTCTTTGAAGATAATGTCTTGATCCGCGAGTTTCTTGAGGAGAAAGGTAATGGCAGAGTTCTTGTTGTTGATGGGGGTGGAAGCATGCGGTGTGCAATTCTGGGGGGCAATCCTGTGGTGCAAGCTCAGAATAATGGATGGGCAGGTATAGTGGTCAATGGCTGTATACGGGATGTTGATGAGATCAATGGTTGTGATATTGGGGTAAGAGCTCTGAACTCCCACCCAATGAAAGCCAATAAGAAGGGGATTGGGGAGAAACATGTACCAATAGCCATTGCTGGGACAAGAATCTCCGATGGGGAATGGCTTTATGCAGATACTGATGGAATTCTGATTTCCCGAACTGAGTTATCTGTCTAA 501 0.475 MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRPVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSMRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPMKANKKGIGEKHVPIAIAGTRISDGEWLYADTDGILISRTELSV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1018 166 SUPERFAMILY RraA-like 4 164 IPR036704 -
Vvi4g1018 166 PANTHER 4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED 3 164 - -
Vvi4g1018 166 CDD RraA_family 7 160 IPR005493 -
Vvi4g1018 166 Gene3D - 3 166 - -
Vvi4g1018 166 NCBIfam RraA family 6 160 IPR010203 GO:0008428|GO:0051252
Vvi4g1018 166 Pfam Aldolase/RraA 6 158 IPR005493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1018 Vvi-Chr4 16788244 16788744 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1018 - - vvi:100263339 335.495