Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1013 ATGGGTTTCCGTTTGCCCTCTATGGTTCATGCCAGGCAAATCCTCAAACTGCAATCTCTTCTTACTAGAAGTCAATCATCTATATTAGCGACAACAGCAGAAGTGCCAAAAGGCCACTTTGCAGTTTATGTTGGAGAAGCTGAAAAGAAGAGATTTGTGGTTCCAATATCTTACTTGAACAATCCTTCATTCCAGAAATTATTGAGCCATGCTGAGGAAGAATTCGGCTTCAATCATCCAATGGGTGGTGTCACAATCCCCTGCAATGAAGATGCTTTCATTGATCTCACTTCTCGGCTACATTCATTATGA 312 0.4135 MGFRLPSMVHARQILKLQSLLTRSQSSILATTAEVPKGHFAVYVGEAEKKRFVVPISYLNNPSFQKLLSHAEEEFGFNHPMGGVTIPCNEDAFIDLTSRLHSL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1013 103 Pfam Auxin responsive protein 16 99 IPR003676 GO:0009733
Vvi4g1013 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1013 Vvi-Chr4 16770015 16770326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1013 4 98 Calmodulin-binding Proteins AT4G34750 41.053 1.37e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1013 K14488 - vvi:100240974 207.994