Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1005 ATGGGGGTTCCATTAGGGCACACCTTTTATGTTTCTTTGAGACTTTTGATGCCTGAATCTGATTTCAATAGAGACGTTGGGGTGTTTCAGTTGACTGCAGAAGTCATGTCGATCAATGGGGATGTGATAGCAAAATCGAGCCATCCATGCATGTTGCGCTTTAGAAGCCTCCCAGTTCAACTCACGCGAACTTTTCTCATGGGGGTTCCACTATTGCTAGGAATTTCAAGTGAAACACAGGAGCTAACCATTGAAATATTAAAGCACAAGGAAGGGTATTCAAGAACCAAAGCCATCAGAGTAACTTTGATTCCAAGGGCTGGAACTTTATCTCTCCCTCAGATTTATGAAGCTGAACTCCTCATGAACTCCCAACTCCCTTGGAAGAAAAAACTGGTGCATAGTTGGAAATGGACATTCTATGTGTGGATGTCCTTGTATGTTTACATTATGCTTCTTGTAGTTCTCATGTGTTGCTTTAGGCCTGTCTTATTCCCTGTAACAACAGCAAGTCAAAGAGATCATAATGAAAGAGATTTGACCATGGAAGTATCCAAAGAACCAGACTCAAGAGCTAGAGATGCTAGAGAGGCTTCAGAATCATTGAAAAGATGGCAACGGAGCAGGAACAAGAGAAAGGTAGATGTTTTGCAGAAGCTCCAACCAGAAACTGTTGGCTCATCTGCTTCAAGCATTACTATAACCAGGGAAGACACAAGTGCGTTTGTTGAAGAGGATGTTGGGGATTCAGAATCAGTGTGTTAG 765 0.4235 MGVPLGHTFYVSLRLLMPESDFNRDVGVFQLTAEVMSINGDVIAKSSHPCMLRFRSLPVQLTRTFLMGVPLLLGISSETQELTIEILKHKEGYSRTKAIRVTLIPRAGTLSLPQIYEAELLMNSQLPWKKKLVHSWKWTFYVWMSLYVYIMLLVVLMCCFRPVLFPVTTASQRDHNERDLTMEVSKEPDSRARDAREASESLKRWQRSRNKRKVDVLQKLQPETVGSSASSITITREDTSAFVEEDVGDSESVC* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1005 254 MobiDBLite consensus disorder prediction 176 212 - -
Vvi4g1005 254 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 3 240 IPR009617 GO:0019915
Vvi4g1005 254 Pfam Putative adipose-regulatory protein (Seipin) 6 147 IPR009617 GO:0019915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1005 Vvi-Chr4 16695702 16700045 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1005 K19365 - vvi:100263320 494.967