Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1003 ATGATTGAATGGGGAGATGTTTACAAGGTGGTGGAAGCCATGGCACCACTCTACGTTGCACTGCTGCTGGGCTACGCCTCCGTGAGGTGGTGGCACATGTTCAGCTCCGATCAATGCGCCGCCATCAACCGCTTCATCTGCTACTTCATTTTCCCATTCTACAGCTTTGATTTCACCTCCCATATCGACCCTTTCTCCATGAATTACAAGTACATGGGGGCCGATATCATGAGCAAGTTCATCTGTGTTGCTGCGCTTGGCCTCTGGTGCAAGTGCAGTAGCAGAACCGGCAGCTATGGCTGGTTCGTCACCTGCTTCAGTCTCTGCACAATGACTAATTCTCTCTTTATCGGGGTGCCCATTTTAGAGGCCATGTATGGCCGGACGGGGGTCAATCTCGTCCTCCAGGCTTCCGTCGTCCAAGTCATTATCTATAGCACCGTCTTCTTGATTCTCTTGGAGTTCTGGAAATCTTTCGTTTCTTTAAACAAAACAATTCCTGAGGACTCTAATATTGCACCGGTGGGGGCTGCAGAGGAAGATTTGGAAGGGCATAGGACGACGGAGGTGTCGGAAAGCTCGGGGCCGTCGTCTTTCTGGCCACTGATGAGGAACGCGTTGCTGAAACTCGTGAAGAACCCAAACATTTATGCCTGTGTTCTTGGCCTCATTTGGGCTTTTCTATCAAAGCGGTGGCATATTGGAATGCCAAAAATTGTGGAGGGATCCGTACAAATCATGTCAAGAGCTGGGACATCCACTGCCATGTTTAGTCTTGGGTTCTTCATGGCAATGCAAGGAAAGGTGATGGCATGTGGAGCGACTCTGACTGCGTTTGGGATGATTATAAGGTTCATTGCTACACCGGTGACCATGGGGGTGGTCGCCTTGGCAATTGGCTTGCGTGGCAATGTTTTGCGCATCGCCATAATCCAGGCTGCATTGCCACAATCACTTGCTTCATTCGTCTTCGTCAAGGAATATGGCTTGCATACAGAAGTGATTAGCACTGCGGTGATCCTTGGAATTATAATTTGTCTTCCCTTGTTGGTTGCATATTACGCGATTTTGGTATACATAAGATGA 1086 0.4899 MIEWGDVYKVVEAMAPLYVALLLGYASVRWWHMFSSDQCAAINRFICYFIFPFYSFDFTSHIDPFSMNYKYMGADIMSKFICVAALGLWCKCSSRTGSYGWFVTCFSLCTMTNSLFIGVPILEAMYGRTGVNLVLQASVVQVIIYSTVFLILLEFWKSFVSLNKTIPEDSNIAPVGAAEEDLEGHRTTEVSESSGPSSFWPLMRNALLKLVKNPNIYACVLGLIWAFLSKRWHIGMPKIVEGSVQIMSRAGTSTAMFSLGFFMAMQGKVMACGATLTAFGMIIRFIATPVTMGVVALAIGLRGNVLRIAIIQAALPQSLASFVFVKEYGLHTEVISTAVILGIIICLPLLVAYYAILVYIR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1003 361 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 357 - -
Vvi4g1003 361 Pfam Membrane transport protein 10 354 IPR004776 GO:0016020|GO:0055085
Vvi4g1003 361 NCBIfam auxin efflux carrier 1 357 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g1003 Vvi-Chr4 16649310 16652943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g1003 1 338 Organic Solute Cotransporters AT5G16530 54.277 1.06e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1003 K13947 - vvi:100242778 725.702