Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1000 ATGGCAACAGCTTCTCCGATGGCCAGCCAGCTCAAGAGCAGCTTCACCTCACCAACAACCTCTAGGGCCCTGCCTGTTGCCTCTCCCAAAGGCCTCTCTGCTTCTCCTCTTAGGCCATTTTCCTCTAGGAGGGCACCCTCCTCTTTCTCCATCAAGGCTATCCAGTCTGAGAAGCCAACATACCAAGTGATCCAGCCCATTAATGGTGATCCATTTATTGGAAGCCTTGAAACACCTATAACTTCAAGCCCATTGATAGCCTGGTACCTGTCCAACCTTCCAGCCTACCGGACTGCGGTAAGCCCAGTTCTTCGGGGCATCGAGGTGGGCCTGGCCCATGGGTTCCTCCTTGTTGGGCCCTTTGTGAAGACCGGCCCATTAAGGGACACCCCCATTGCTGGGCCAGCAGGGTCTCTAGCTGCTGGTGGACTTGTTGTTATACTGAGCATCTGCTTGACAATGTATGGAATTGCATCCTTCAAGGAAGGAGAGCCGTCGATCGCTCCGAGTTTAACCCTCACCGGGCGGACCAAGGAGCCGGACCAGCTCCAATCGGCCGACGGTTGGGCCAAGTTCACCGGAGGGTTCTTCTTCGGAGGAATTTCCGGCGTCACTTGGGCTTACTTCCTCCTCTATGTCCTAAACCTTCCTTACTTCGTCAAGTAG 666 0.5465 MATASPMASQLKSSFTSPTTSRALPVASPKGLSASPLRPFSSRRAPSSFSIKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPVLRGIEVGLAHGFLLVGPFVKTGPLRDTPIAGPAGSLAAGGLVVILSICLTMYGIASFKEGEPSIAPSLTLTGRTKEPDQLQSADGWAKFTGGFFFGGISGVTWAYFLLYVLNLPYFVK* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1000 221 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC 2 221 IPR022980 -
Vvi4g1000 221 MobiDBLite consensus disorder prediction 1 26 - -
Vvi4g1000 221 FunFam Photosystem I reaction center subunit XI 58 221 - -
Vvi4g1000 221 MobiDBLite consensus disorder prediction 1 44 - -
Vvi4g1000 221 SUPERFAMILY Photosystem I reaction center subunit XI, PsaL 64 220 IPR036592 GO:0009522|GO:0009538|GO:0015979
Vvi4g1000 221 Pfam Photosystem I reaction centre subunit XI 63 214 IPR003757 GO:0009522|GO:0009538|GO:0015979
Vvi4g1000 221 Gene3D Photosystem I PsaL, reaction centre subunit XI 58 221 IPR036592 GO:0009522|GO:0009538|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1000 K02699 - vvi:100242802 389.037