Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0999 ATGAGAGACCGAATGGAGAGGCTCGTCGTTCTTCCCTTCACTGCAGGCTGTGTGTCTTATGCCAGTGTGGCTGTGAGTGAGCAGCAGCCTAGAAGATCAAAACCTGACACAAACTCATCTACCATCAGAGCACAAGAGGAAGATCAAGAAAGCTTCTCCGATAGCATGAAGAACTCATTCAGGCTCCTGGCCCTCCCAAAGCCAAACATCTCCACCGGTTTCCATAGACTGGTGAAGGGTTTCAAGAACTTCTCTCAATTCTTTGTCCCTAAGGAAGACATGGAAGACTCGGACGAGGAGATGCAGATAGGTTTTCCAACCGATGTGAAGCACGTTACACACATAGGATGGGATGGTTCTGCAACTACAAACCCTATAAAGGGCTGGGACAACCTCATTCCACCAGAGTTGCTGTCTCTCCCTGCTGTTTCCCTGAGGCAGTTTTAG 447 0.4899 MRDRMERLVVLPFTAGCVSYASVAVSEQQPRRSKPDTNSSTIRAQEEDQESFSDSMKNSFRLLALPKPNISTGFHRLVKGFKNFSQFFVPKEDMEDSDEEMQIGFPTDVKHVTHIGWDGSATTNPIKGWDNLIPPELLSLPAVSLRQF* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0999 148 CDD CRIB 101 135 - -
Vvi4g0999 148 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC2 1 148 IPR044509 -
Vvi4g0999 148 MobiDBLite consensus disorder prediction 25 40 - -
Vvi4g0999 148 Gene3D CRIB domain 98 140 IPR036936 -
Vvi4g0999 148 Pfam P21-Rho-binding domain 102 132 IPR000095 -
Vvi4g0999 148 ProSiteProfiles CRIB domain profile. 103 116 IPR000095 -
Vvi4g0999 148 SMART PBD_5 103 136 IPR000095 -
Vvi4g0999 148 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0999 Vvi-Chr4 16612777 16613407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0999 - - vvi:100259906 301.982