Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0997 ATGGGTTCTTATTTGTACTTCAGGGCAAGTGGAAGGAGATTTGGTTTGGTTGCTGTTGTTTTTCTCCTTGCGTCCATCTTTTGCGTGGCCTTGTCTCAGGGTGAGACGAATGGATCGGTTCTGGATCTGGGACGGCGTAGCAAGATTGTTCTGGAGGACCTTGAGGTTGAAACTACAGGAGACAAGAAGGACCCTGATTCTATTAGTCTTGATCTCAGTTTGGATTCCGGTCTTGGAGTTTTTGATGCTTTCTTTGCAAGTTTGTCAATGATAATTGTTAGTGAGATTGGAGATGAAACATTTATAATAGCAGCTCTTATGGCAATGAGACACCCTAAATCAATTGTTTTATCTGGTGCGCTCAGTGCTTTGATTGTAATGACGGTACTCTCCACTGGGCTTGGCAGGATTGTGCCAAATTTGATATCAAGGAAGCATACAAATAGTGCAGCTACAGTTCTTTATGCATTTTTCGGACTGCGGCTGCTTTATATTGCTTGGAGATCAGATTCAAAGGCATCCCAGAAAAAGGAAATGGAGGAAGTTGAAGAGAAACTTGAGTCTGGACAAGGGAAAACAAGTTTCCGCCGCTTCTTTTCAAGATTCTGCACACCAATATTCTTGGAGTCTTTTATTTTGACTTTTCTAGCCGAGTGGGGGGATCGCAGCCAGATCGCAACAATTGCGCTGGCAACACACAAGAATGCGATCGGAGTAGCAGTGGGGGCAACAATAGGGCACACAATCTGCACATCACTGGCAGTGGTGGGAGGAAGCATGCTAGCATCCAAGATCTCCCAAGGCACAGTTGCAACAGTAGGAGGCCTGCTCTTCCTGGGCTTTTCCCTCTCCTCCTACTTCTATCCTCCTCTTTGA 876 0.4543 MGSYLYFRASGRRFGLVAVVFLLASIFCVALSQGETNGSVLDLGRRSKIVLEDLEVETTGDKKDPDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLGFSLSSYFYPPL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0997 291 Coils Coil 172 192 - -
Vvi4g0997 291 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 67 288 IPR001727 -
Vvi4g0997 291 Pfam Uncharacterized protein family UPF0016 86 159 IPR001727 -
Vvi4g0997 291 Pfam Uncharacterized protein family UPF0016 209 281 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0997 Vvi-Chr4 16599678 16607448 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0997 K23541 - vvi:100265089 509.99