Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0992 ATGGCTATGCAACAAAAGTTTATAGCTTGTGGTACAATCCTAACGGTGTTCAGAATGGTCTTGCAGTTCATTGTCAGACCAGCAACAATGGTTATCGACACTATTACTATTGGTCTGCATGGTGACGTTTTGCGCATTGCTATCATACAAATGGCGGTGTTCCCACAATCGATCACATCATTCATTTTTGCTAGAGAAAATAGATTGCATGCGGAAGTGCTTAGCCTAAAAGAGTTCCTAGTTAGTGTTGGTTGA 255 0.4078 MAMQQKFIACGTILTVFRMVLQFIVRPATMVIDTITIGLHGDVLRIAIIQMAVFPQSITSFIFARENRLHAEVLSLKEFLVSVG* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0992 84 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 77 - -
Vvi4g0992 84 Pfam Membrane transport protein 1 75 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0992 Vvi-Chr4 16523767 16527061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0992 1 75 Organic Solute Cotransporters AT5G16530 68.000 1.24e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0992 K13947 - vvi:100244520 103.219