Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0991 ATGATAGGATGGGAGGATGTATACAAGGTGGTGGTTGCCATGTTACCACTCTATGTTGCACTGGTCCTAGGGTATGGCTCTGTGAAGTGGTGGCGAATTTTTACGCCTGATCAGTGTGACGCGATCAACCGCCTTGTTTGCTACTTCACTCTCCCCCTTTTCACCTTTGAGTTCACTGCCCATGTTGATCCCTTCAAGATGAACTACCTCTTCATTGGTGCGGATGCCGTCTCCAAGTTGATAATTGTATTGGTGCTTGCCCTTTGGGCCAAGTGCAGCAGCAAGGGCAGCTATTGCTGGTCTATAACAAGCTTCTCTTTGGCCACCTTGACCAACTCCCTGGTTGTGGGGGTGCCTTTGATAAAAGCCATGTATGGGCCGCTAGGAGTTGATCTTGTCGTCCAATCATCAGTCGTGCAGGCCATCATCTGGCTCACACTTCTGCTATTTGTTCTGGAGTTTCGAAGGACAGGTACCGGCATTTCTTCAAATACTACTATGGGAGACTCTGGTGTGATAGAGGTTGAGCCTGGAAAAGATTTAGAAACTAATGAGATGGTGGTGAGCACTAGACTATCTTTCTGGTCATTGATGAGGAAAGTATGGCTGAAACTTGCACAAAACCCTAACTCCTACGCTTGTATTATCGGTATCGTCTGGGCTTTCATAGCGAACAGGTGGCATTTTGAAATGCCAAGCATCATGGAGGGATCGATATTGATCATGTCAAGAGCTGGAACAGGCACTGCCATGTTTAGTATGGGGCTCTTCATGGCTATGCAAGAGAAGATTATAGCTTGTGGCACAACCCTAACGGTGTTCGGGATGGTCTTGCGGTTTATTGCTGGACCAGCAGCAATGGCTATCGGCGCTATTGCTGTTGGTCTGCATGGTGACGTTTTGCGCATTGCTATCATACAAGCCGCGGTACCACAATCGATCACATCATTTATCTATGCTAAAGAATATGGATTGCATGCAGATGTGCTTAGCACAGCGGTGATTTTTGGCATGATCGTCTCCCTTCCGTTGTTGGTCGGTTACTATGCGGTTTTAGAGTTTTTGAATTGA 1071 0.4706 MIGWEDVYKVVVAMLPLYVALVLGYGSVKWWRIFTPDQCDAINRLVCYFTLPLFTFEFTAHVDPFKMNYLFIGADAVSKLIIVLVLALWAKCSSKGSYCWSITSFSLATLTNSLVVGVPLIKAMYGPLGVDLVVQSSVVQAIIWLTLLLFVLEFRRTGTGISSNTTMGDSGVIEVEPGKDLETNEMVVSTRLSFWSLMRKVWLKLAQNPNSYACIIGIVWAFIANRWHFEMPSIMEGSILIMSRAGTGTAMFSMGLFMAMQEKIIACGTTLTVFGMVLRFIAGPAAMAIGAIAVGLHGDVLRIAIIQAAVPQSITSFIYAKEYGLHADVLSTAVIFGMIVSLPLLVGYYAVLEFLN* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0991 356 NCBIfam auxin efflux carrier 1 352 IPR014024 -
Vvi4g0991 356 Pfam Membrane transport protein 193 349 IPR004776 GO:0016020|GO:0055085
Vvi4g0991 356 Pfam Membrane transport protein 10 166 IPR004776 GO:0016020|GO:0055085
Vvi4g0991 356 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0991 Vvi-Chr4 16483885 16487138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0991 1 333 Organic Solute Cotransporters AT5G16530 75.075 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0991 K13947 - vvi:100244520 697.582