Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0990 ATGGCATCGGTGTTTCTGTATCACGTGGTGGGCGATCTGACGGTGGGGAAGCCGGAGCTGGTGGAGTTTCCGGAGACAGAGACTGTGGAATCAGCAATTCGGGTCATCGGAGAATCGGCAGAAGGCAGTATACCTATTTGGAAGAGAAGGTCACATGTGGGTGTGATGGAAAAATCGGAAATGAGGCAACAAAGGTTTGTGGGCATCCTCAATTCTCTTGATATTGTTGCTTTTCTGGCCAGAGATGCATGTTTAGTGGATCAGGAGAAGGCCATGAAGACCCCGGTTTCAGAGGTTGTTGTTCCCAACAATTCTCTATTGAGAGAGGTTGATCCTGCAACAAGATTGATAGACGCCCTGGAGATGATGAAGCATGGTTTGAAGCGTCTTCTTGTTCCCAAGAGCGTGGTATGGAAAGGCATGAGCAAGCGATTCTCAATTCTCTACAATGGCAAGTGGCTCAAGAACCTTGATGCCTCCAGCAGCAGCACCAACCTTGCTCCAAATGCCAACCGGCCTTCCTCATCCTCCACCCCGTCCAGCCGCAACAAGTTTTGCTGTCTTTCAAGAGAAGATGTCATCCGTTTTGTCATTGGTTGCCTTGGTGCACTAGCTCCATTGCCTCTTTCTTCCATCTCCTCCCTTGGAGCCATCAGCCCAAACTACTACTCCATTGAAGCCTCCTTCCCAGCCATCCAAGTCACCCAAAAGCTGCCCCAGGATCCTAGTGCAGTTGCTGTTGTGGAGTCCACACCAGATGGCCAATATAAGATCATTGGGGAGATCTCTGCCTGCAAACTATGGAAATGTGATTACTTAGCTGCGGCATGGGCTTTAGCCAACCTCTCTGCAGGGCAGTTTGTGATGGGAGTTGAGGATAACGTGACCTCAAGATCCCTTCCTCATTTTTCAGTGAATTTAACTGGTGGTGAGAACAATATGGCTAATGGGGGTGCCTCAACAAGGCAACGCAAGTTTAGTAGCAGGAGCATTGGATTTTTTAGTAACCCAGCAAGCCCAAGTTTTGGGGCTAGTAGGAGCATGTATAGGGGCAGAAGTGCACCCTTAACATGTAAAGTTACGAGTTCGTTGGCTGCAGTCATGGCTCAGATGCTGTCTCATAGGGCAACCCATGTGTGGGTGACTGAGGCCGAAAGTGAAGACATCTTAGTTGGGGTGGTGGGTTATGCCGACATCTTGGCTGCTGTGATCAAACAGCCTGCACCTGTTATTCCATCAACAACTCCATCTGGTGAGGGCTATGCAACTGAGATTCAAAACTAG 1284 0.4922 MASVFLYHVVGDLTVGKPELVEFPETETVESAIRVIGESAEGSIPIWKRRSHVGVMEKSEMRQQRFVGILNSLDIVAFLARDACLVDQEKAMKTPVSEVVVPNNSLLREVDPATRLIDALEMMKHGLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSSSSTPSSRNKFCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQVTQKLPQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVTSRSLPHFSVNLTGGENNMANGGASTRQRKFSSRSIGFFSNPASPSFGASRSMYRGRSAPLTCKVTSSLAAVMAQMLSHRATHVWVTEAESEDILVGVVGYADILAAVIKQPAPVIPSTTPSGEGYATEIQN* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0990 427 MobiDBLite consensus disorder prediction 162 182 - -
Vvi4g0990 427 SUPERFAMILY CBS-domain pair 5 133 IPR046342 -
Vvi4g0990 427 ProSiteProfiles CBS domain profile. 348 410 IPR000644 -
Vvi4g0990 427 CDD CBS_pair_SF 23 132 - -
Vvi4g0990 427 Gene3D - 337 406 IPR046342 -
Vvi4g0990 427 Gene3D - 5 139 IPR046342 -
Vvi4g0990 427 SUPERFAMILY CBS-domain pair 353 406 IPR046342 -
Vvi4g0990 427 Pfam CBS domain 354 403 IPR000644 -
Vvi4g0990 427 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 409 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0990 - - vvi:100266840 790.801