Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0985 ATGCATGAAATTATTGAGTCCCATGCAAAGCCCTACCATAATATGATGAACCAACATGGGAAAAAGGGTGATAACATTGTGCATGGAATCAGAGAACATGGCAATGCAGTAAGATTGGCACCTAGGATCTTTGAAACTGTGAAGGGAAAGCTGAGCTTGGGGGCAAGGATTCTTCAACAAGGAGGCATGAAGAGAATTTTTAAGCAACTTTTTGGGGTTACGGAAGGAGAGAATCTGTTGAAGGCTTCTCAATGCTATTTATCAACAACAACAGGCCCCATAGCAGGCCTCCTCTTTCTCGCTACTCAGAGGGTTGCCTTTGGCAGTGAGAGATCCATCAAATTCTCTTCTCCAAATAGTGAATTGGTTAGAATCTATTACAAGGTTTCAATCCCACTGAGAAAGATAAAGAGAGTAGACCAAAGTGAGAATATGAAAAATCCATCTCAGAAGTACATGGGAGTAGTCACTGCTGATGATTTTGAGTTCTGGTTTATGGGGTTCTTGAATTATCAGAAAGCTTTCAACTGTCTCCAAAAGGCATTAATGTCTCAATCTTGA 561 0.4082 MHEIIESHAKPYHNMMNQHGKKGDNIVHGIREHGNAVRLAPRIFETVKGKLSLGARILQQGGMKRIFKQLFGVTEGENLLKASQCYLSTTTGPIAGLLFLATQRVAFGSERSIKFSSPNSELVRIYYKVSIPLRKIKRVDQSENMKNPSQKYMGVVTADDFEFWFMGFLNYQKAFNCLQKALMSQS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0985 186 Gene3D - 63 183 IPR011993 -
Vvi4g0985 186 PANTHER GEM-LIKE PROTEIN 2 8 184 IPR037848 -
Vvi4g0985 186 SMART gram2001c 65 143 IPR004182 -
Vvi4g0985 186 Pfam GRAM domain 66 182 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0985 Vvi-Chr4 16361158 16362655 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0985 - - vvi:100264987 335.495