Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0984 ATGGCCTACCAGCTATCCGTTACACATCACCATGAAGATGAAAGATGCCAAAAGAGTCGTTCATTCCAGATCAGCACATGGACACTTGGTCATCACTTTAACTTGTTGAGGAGTTTCAGTCCTTTTCCAATGGCCACTTCCTTCTCCACAATGGCCTATCTTATTCTGCAAAAGGTCTGGCTATATCCATGGTCATGCAAAAATCCACCAAGTCATGGACCCCCCACCTCCTCAAGTGTGAGATTAGGGCCTAAGATCTCTGAAACTGTGAAGGGGAAGTTGAGCTTAGGGGCTAGAATTCTTCAACTAGGGGGAGTGAAGAGAGTTTTCAAGCAAATTTTTGGTGTTGAAGAAGGAGAGAAGCTATTGAAGGCTTCTCAATGCTATTTATCAACAACAGCAGGTCCTCTAGCTGGCCTCCTCTTTATCTCTACTCAAAGGGTTGCCTTTTGCAGTGAGAGATCAATCAAATTCTTTTCTCCAAATGGTGAATTGGTTAGATTTCATTACAAGGTCTCAATCCCACTGAGAAAGGTAAAGAGAGTAGACCCAAGTGAGAATGTGAAAAACCCATCTCAGAAGTACATGGAAATAGTCACTCTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAATTACCAGAAATCTTTCAACTGTCTCCAACAGGCACTGTCTCAATCTTGA 687 0.425 MAYQLSVTHHHEDERCQKSRSFQISTWTLGHHFNLLRSFSPFPMATSFSTMAYLILQKVWLYPWSCKNPPSHGPPTSSSVRLGPKISETVKGKLSLGARILQLGGVKRVFKQIFGVEEGEKLLKASQCYLSTTAGPLAGLLFISTQRVAFCSERSIKFFSPNGELVRFHYKVSIPLRKVKRVDPSENVKNPSQKYMEIVTLDNFDFWFMGFLNYQKSFNCLQQALSQS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0984 228 PANTHER GEM-LIKE PROTEIN 2 76 227 IPR037848 -
Vvi4g0984 228 SMART gram2001c 108 186 IPR004182 -
Vvi4g0984 228 Pfam GRAM domain 109 226 IPR004182 -
Vvi4g0984 228 Gene3D - 106 227 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0984 Vvi-Chr4 16354752 16356634 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0984 - - vvi:100256602 291.967