Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0983 ATGAAGAGTCAACTCCAAGAACAAGTTATCGGAATCCCAGTCAGCTGCCAATATGATAAGCCATCTCTTTCAAATGGCTCTAGGGCAATCATCCAAAAAAAATGGGATTCCACAAATTACAGGATCAACAAAAACAGGAAGAAGGCAGACAATTTTGTGGATGGAGTCCGAGAGCATGTGAGACTAGGGCCTAAGTTCTCTGAAACGGTGAAGGGAAAGTTGAGCTTGGGGGCTAGGATTCTTCAAGTTGGAGGAGTGAAGAGAGTTTTCAAGCAAATTTTTGGTGTTGAAGGAGAGAAGCTATTGAAGGCTTCCCAATGCTACTTATCAACAACAGGAGGCCCTATAGCTGGTCTCCTCTTTATCTCTTCTCAGAGGATTGCCTTTTGCAGTGATAGATCAATCAAATTCTCTTCTCCAAATGGTGAATTGATTAGGATCCATTACAAGGTCTCTATCCCACTGAGAAAGATAAAAAGAGCCAACCAAAGTGAGAATGTGAAAAATCCATCTCAGAAGTACATGGAAATCGTTACTGTGGATAACTTTGACTTCTGGTTTATGGGATTCTTGAATTACCAGAAAGCTTTCAGCTATCTCCAACAGGCACTCCATGAAGCGCAGAATCTGGTTGAGAACTATGCTATCACATAA 654 0.4144 MKSQLQEQVIGIPVSCQYDKPSLSNGSRAIIQKKWDSTNYRINKNRKKADNFVDGVREHVRLGPKFSETVKGKLSLGARILQVGGVKRVFKQIFGVEGEKLLKASQCYLSTTGGPIAGLLFISSQRIAFCSDRSIKFSSPNGELIRIHYKVSIPLRKIKRANQSENVKNPSQKYMEIVTVDNFDFWFMGFLNYQKAFSYLQQALHEAQNLVENYAIT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0983 217 Gene3D - 86 206 IPR011993 -
Vvi4g0983 217 PANTHER GEM-LIKE PROTEIN 2 4 207 IPR037848 -
Vvi4g0983 217 Coils Coil 204 217 - -
Vvi4g0983 217 SMART gram2001c 88 165 IPR004182 -
Vvi4g0983 217 Pfam GRAM domain 89 206 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0983 Vvi-Chr4 16349852 16350977 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0983 - - vvi:100254689 424.091