Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0981 ATGAAGAACCAGCTCCAAGAACACATTATTGGAATCCCAGTCAACTGCCAATACGATAGGCCATCTCCTCCAAATGGCTCTGGGGCAATAATTCCAAAAAAAATGAATTCAATGAATTATAAGATGAACAATAACAGGAAGAAGGCAGACAATTTTGTGGATGGAGTCCGAGAGCATGTGAGATTAGGGCTTAAGTTCTCTGAAACCGTGAAGGGAAAGTTGAGCTTGGGGGCTAGGATTCTTCAAATTGGGGGAATGAAAAGAGTTTTCAGACAAAATTTTGGTGTTAGAGAAGGAGAAAAGCTATTGAAGGTTTCCCAATGCTATTTATCGACAACAGCAGGCCCTATAGCTGGCCTCCTCTTTATCTCTACTCAAAGAGTTGCCTTTTGTAGTGAAAGGTCAATCAAATTTTCTTCTCCAAATGGTGAATTAGTTAGAATCCATTACAAGGTCTCTATCCCACTAAGAAAGATAAAGAGAGCCAATCAAAGCGAGAATGTGAAAAAACCTTCTCAGAAGTACATGGAAATTGTTACTGTGGATAACTTTGACTTCTGGTTTATGAGATTCTTGAATTACCAAAAAGCTTTCAGCTATCTTCGACAGGCAATCTCTCAAGTGCAGAATCCAGTCCAGAAGTGA 645 0.3953 MKNQLQEHIIGIPVNCQYDRPSPPNGSGAIIPKKMNSMNYKMNNNRKKADNFVDGVREHVRLGLKFSETVKGKLSLGARILQIGGMKRVFRQNFGVREGEKLLKVSQCYLSTTAGPIAGLLFISTQRVAFCSERSIKFSSPNGELVRIHYKVSIPLRKIKRANQSENVKKPSQKYMEIVTVDNFDFWFMRFLNYQKAFSYLRQAISQVQNPVQK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0981 214 Pfam GRAM domain 89 208 IPR004182 -
Vvi4g0981 214 Gene3D - 86 207 IPR011993 -
Vvi4g0981 214 PANTHER GEM-LIKE PROTEIN 2 4 207 IPR037848 -
Vvi4g0981 214 SMART gram2001c 88 166 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0981 Vvi-Chr4 16329867 16330786 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0981 - - vvi:100254942 411.379