Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0979 ATGACGATGACCCAGTTTGCAATGGTTGAGGAATTGGCTTTTCTTATTAAGGACAATCTTCCTTGCAAGCATCTTGTTCTCTCAATTGAAGAAGCCTTGGTCAACTTCCTTCAAGACGATAACAGTCTAGATGGGGTCATGGAGCTGGAACCGATGAATCCATACGAGCGTCTTCTCGTGCATCGTCTTGCTGATATATTTGGATTTGCCCATGTATCCATTGGCGAAGGAGATGAAAGGCATCTAACTTTAGAGCGGTGCCCAGAGACGTCAATACCTTCAATTCTTGTTAGTGATATTATATGGCAGTATCAGGAATCTCAACCTCCAACAATGTCACACCAACTGTTAAGAAGAAATGAAGCTTCCCCAGTGTTGAAAGCTACAGAGCCTTCTCTCCAGTATTCACTTGAAGAGAGGGAGGCGGCTTATCTGGCTGCTCGTGAGCGGATTTTCTCAATGGATGAAGGTGAGATCAGAGAATCTGTGCAGCAGAAGCCCCGAAATGTTCCTGTGGTTGCTCGACGCATGATTGCCCATGCGCTAGGTCACAGAATCAACTCATGCAACCAGGATGTTAAAGAATGTGAAGGCCAAATTGCAGAGCTGACTGTCCAAGACAAAGATTCGAGTGCAGAAGCTTGTCAAAATGAAAACTCGCGCAGCAAAACAAGTGTGGGTAGCCATAATGGTAATGGTGCATTGTCTCATGGTGGAAGGAAGACACCCCAGAAATCAGCAGACAGGAGTCCTTCCAACAGTAGCAGTCCCCCAAGCAGAAGAAACAGATCGCGTGTTTGCACAGAGAACCCAAAGGAAGTACATTTGGGAGCTGCAAGGAGGATGTTTGCTCATGCCCTGGGATTGCAATCACCAAAGGATGCTCTTATTTCAAAACCCGGAAACACACAGCAGATGAACACTGAGTAG 930 0.4613 MTMTQFAMVEELAFLIKDNLPCKHLVLSIEEALVNFLQDDNSLDGVMELEPMNPYERLLVHRLADIFGFAHVSIGEGDERHLTLERCPETSIPSILVSDIIWQYQESQPPTMSHQLLRRNEASPVLKATEPSLQYSLEEREAAYLAARERIFSMDEGEIRESVQQKPRNVPVVARRMIAHALGHRINSCNQDVKECEGQIAELTVQDKDSSAEACQNENSRSKTSVGSHNGNGALSHGGRKTPQKSADRSPSNSSSPPSRRNRSRVCTENPKEVHLGAARRMFAHALGLQSPKDALISKPGNTQQMNTE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0979 309 MobiDBLite consensus disorder prediction 206 264 - -
Vvi4g0979 309 Coils Coil 186 206 - -
Vvi4g0979 309 MobiDBLite consensus disorder prediction 290 309 - -
Vvi4g0979 309 Pfam SUZ domain 117 155 IPR024771 -
Vvi4g0979 309 ProSiteProfiles R3H domain profile. 23 88 IPR001374 GO:0003676
Vvi4g0979 309 SMART R3H_4 10 87 IPR001374 GO:0003676
Vvi4g0979 309 ProSiteProfiles SUZ domain profile. 91 156 IPR024771 -
Vvi4g0979 309 Gene3D - 2 123 IPR036867 GO:0003676
Vvi4g0979 309 MobiDBLite consensus disorder prediction 206 273 - -
Vvi4g0979 309 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 9 257 - -
Vvi4g0979 309 CDD R3H_encore_like 22 87 - -
Vvi4g0979 309 SUPERFAMILY R3H domain 13 120 IPR036867 GO:0003676
Vvi4g0979 309 Pfam R3H domain 25 85 IPR001374 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0979 - - vvi:104879148 590.497