Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0978 ATGGCCATTAAAATCATCAACAGCAGCAGCAATACTACTAGTACTGGCGATAACGGTAACAGGAAGCTTCCCATATTGTTATTTGACATCATGGACACTATTGTTAGAGACCCTTTCTACCATGATGTCCCTGTCTTCTTCAGAATGCCTATGGAGGAACTATTAGAATGCAAGCATCCAACTGCATGGATCGAGTTTGAAAAGGGACTGATTAATGAGACTGAGTTAGCCAGAAAATTCTTTAAGGATGGGCGGGATTTTGATTTGGAAGGCCTTAAAAATTGTATGAGGAGAGGATATTCATACATAGAAGGTGTTGAAGGATTGCTTCGTGCTTTAAAACAAAACAACTATGAAATGCATGCTTTCACCAACTATCCTATATGGTATGAAATGATTGAGGACAAGTTAAAGTTATCAACATTCTTATCTTGGACATTTTGTTCATGTACAATTGGAAAGCGGAAGCCTGAGCCTGATTTCTACTTGGAAGTTTTGAGGCATCTTGATGTTGAGCCTGCAAGCTGTGTCTTCATCGATGACAGAATGAGAAACGTTGAAGCTGCCGAAGATGTTGGGATTGTTGGCCTGCATTTCAAGAATGCAGATTCTCTGCGTCAAGACCTCTCTCTACTAGGGATTGACATTTAA 651 0.3994 MAIKIINSSSNTTSTGDNGNRKLPILLFDIMDTIVRDPFYHDVPVFFRMPMEELLECKHPTAWIEFEKGLINETELARKFFKDGRDFDLEGLKNCMRRGYSYIEGVEGLLRALKQNNYEMHAFTNYPIWYEMIEDKLKLSTFLSWTFCSCTIGKRKPEPDFYLEVLRHLDVEPASCVFIDDRMRNVEAAEDVGIVGLHFKNADSLRQDLSLLGIDI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0978 216 Pfam Haloacid dehalogenase-like hydrolase 93 194 IPR041492 -
Vvi4g0978 216 NCBIfam HAD-IA family hydrolase 101 195 IPR006439 -
Vvi4g0978 216 Gene3D - 24 213 IPR023214 -
Vvi4g0978 216 PANTHER ALPHA-D-GLUCOSE 1-PHOSPHATE PHOSPHATASE 16 215 - -
Vvi4g0978 216 SUPERFAMILY HAD-like 26 209 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0978 K20860 - vvi:100261651 432.18