Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0973 ATGTCTCAAACAAACATTGGTGACGATGAGGTTGACATTGTGATTGGTGCACTCCATGCTGACCTCACATCCTTCCTGAATGAATGGAGACCACTATTCTCCCGATTTCACCTGATAATCGTGAAAGACCCTGACCTCAGAGAGGAGCTCAAAATACCAGAAGGCTTTAACCTCCACGTCTATACCAAGTCCGACATTGACCGAGTGGTGGGCTCGTCTTACACTGCCATTAATTTCTCTGGTTACTCATGTCGGTACTTTGGCTATCTCATGTCTAGGAAAAAGTACATCTTCTCAGTCGATGATGACTGCATCCCAGCAAAGGACGATAAGGGTCTTTCAGTAGATGCGGTCGACCAGCATATCACCAACCTTGCGACTCCAGCCACCCCTTTCTTCTTTAACACACTGTACGACCCTTTCCGCAAAGGAACAGATTTTGTTCGTGGGTACCCATTTAGCTTGCGGAGTGGAGTAACATGTGCTCTGTCATGTGGGCTCTGGCTGAACTTAGCTGACCACGATGCGCCCACACAAGCCCTCAAGCCAGGGCATAGGAATTCTCGGTATGTTGACGCTGTTCTGACTGTTCCAGCCAGAGCTCTGATGCCTGTGAGCGGTGTGAACATTGCTTTCAACCGGGAGCTGGCTGGACCAGCCTTGTTCCCAGGTCTGAGGCTGGCAGCTGAAGGAAAGCTGAGGTGGGAAACAGTGGAAGACATATGGTGCGGACTCTGTGTGAAGGTGGTATGCGATCACCTTGGGCTTGGTGTGAAAACCGGGCTGCCATATGTGTGGAGAAACGACAGAGGCAATGCCATAGAAAGCTTGAAGAAAGAGTGGGAAGGCGTGAAGCTGATGGAGGAAGTCGTCCCGTTCTTTCAGTCTGTGAGGTTGTCACAAGCAGCAGTCACAACAGAGGACTGCATGCTGGAGATAGTGGCATTGGTGAAGGAGCGGCTGGCAACATTGGATCCGGTCTTCGCTCGTGCTGCCCAAGCCATGGCCGATTGGATCAAGCTCTGGAAGGCAGTTGGATCAGGATCAGGATCCTCGCGGCCTTCTAATGGGTAA 1074 0.5112 MSQTNIGDDEVDIVIGALHADLTSFLNEWRPLFSRFHLIIVKDPDLREELKIPEGFNLHVYTKSDIDRVVGSSYTAINFSGYSCRYFGYLMSRKKYIFSVDDDCIPAKDDKGLSVDAVDQHITNLATPATPFFFNTLYDPFRKGTDFVRGYPFSLRSGVTCALSCGLWLNLADHDAPTQALKPGHRNSRYVDAVLTVPARALMPVSGVNIAFNRELAGPALFPGLRLAAEGKLRWETVEDIWCGLCVKVVCDHLGLGVKTGLPYVWRNDRGNAIESLKKEWEGVKLMEEVVPFFQSVRLSQAAVTTEDCMLEIVALVKERLATLDPVFARAAQAMADWIKLWKAVGSGSGSSRPSNG* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0973 357 Pfam Reversibly glycosylated polypeptide 7 346 IPR037595 -
Vvi4g0973 357 PIRSF UPTG 1 350 IPR004901 GO:0016866|GO:0071669
Vvi4g0973 357 PANTHER UDP-ARABINOSE MUTASE 3 345 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0973 Vvi-Chr4 16084211 16085284 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0973 K13379 - vvi:100246089 707.597