Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0967 ATGGACTACTGTTGTCTATGGATTAAAGAACCAAAGCTATTTGTGGATTCATTATCAACTGCTTCTGAGTATCTGAGGAACAATGCAAGCGAATCAAAGAAGGTCATAGACTACAAAGATTGGCAAATAGCACTAAGCAGAAGATTCAGGGCCATCAAAATTTGGGTGGTGATTCGAAGGCATGGCTTAGACAACCTCATGTTCCATATACGCAGTGATGTAAACTTGGCCAAGCGATTTGAGACACATGTAGCCAAAGATCCCAGATTTGAGGTTATGGTGCCGAGAAGGTTTGCACTGGTGTGCTTCAGACTGAGGCCCAAAGAAGAAGGGGAGGGCACAGAGCTGAACTTAAGGCTACTAATGGCTGTCAATGGAAGTGGAGGTGCATTCATGACTCATGCAGTGGTGGGTGGGATTTATATCATACGCTGTGCAATTGGGTCCACGTTGACTGAGACTAGGCATGTTAATAGTCTATGGAAGCTCATTCAGGAAAAGGCTCAACTCGTACTAAAGGAGTCTGGTTTGGCATTGGAGGAATACCAGTAG 552 0.4457 MDYCCLWIKEPKLFVDSLSTASEYLRNNASESKKVIDYKDWQIALSRRFRAIKIWVVIRRHGLDNLMFHIRSDVNLAKRFETHVAKDPRFEVMVPRRFALVCFRLRPKEEGEGTELNLRLLMAVNGSGGAFMTHAVVGGIYIIRCAIGSTLTETRHVNSLWKLIQEKAQLVLKESGLALEEYQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0967 183 PRINTS Aromatic-L-amino-acid decarboxylase signature 44 59 IPR010977 GO:0006520|GO:0016831
Vvi4g0967 183 PRINTS Aromatic-L-amino-acid decarboxylase signature 87 106 IPR010977 GO:0006520|GO:0016831
Vvi4g0967 183 Gene3D - 1 71 IPR015421 GO:0003824
Vvi4g0967 183 SUPERFAMILY PLP-dependent transferases 2 169 IPR015424 -
Vvi4g0967 183 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 106 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vvi4g0967 183 Coils Coil 182 183 - -
Vvi4g0967 183 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 1 174 - -
Vvi4g0967 183 Gene3D Aspartate Aminotransferase, domain 1 72 180 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0967 Vvi-Chr4 15896946 15897497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0967 K01593 - vvi:100247842 370.163