Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0966 ATGGCAGCCACTGAGGAATCATCTCTTCCCGTTGATTTTGAGGTGGAAATGGCAGCCGTGGAGAACTCATCTTCCTTTGATTTCGAAGTAGAAATTTCTGAAGAAGAAGGCAAGGAGGACAGCAGTTCCTCAGGCGGCAACCTCTTTTCTTCTTCAGGAGTAACGGGGATTACTGACAGGAATTTGCCCAGAGACAATCCTATTCGTCCGGAAACATCAACTTCTGGAAAATCAAATTCATCTTCAAGTCAGCTTACCAATACTGAGACATTGAGAAAGAAGAAGAGATATAGTCAATTTCTAACATTTATGGATGGGAAAGTTCCTATTAGAAAGATGAGGAAATTATTGAGAGAGCTTGCTACTGTTAAAGATGGAACTGTCCGGTTTGAAGTACCAGAAGATATGAAATCCCAAAGCCTTGATTTTGGAGCAGGAGGTGCTTATAATGACAATATCATTGAAGAACATGTGGATGCAATAGACAATCATGTACCTCCACTTCAAATAGTAATGCTCATTGTTGGAACACGAGGAGATGTACAGCCATTTGTTGCCATTGGAAAAGGCTTACAGGCATGTGGTCATAGAGTCAGACTGGCAACTCATTCTAATTTCAAAGAATTTGTCTTGAATGCTGGGTTGGAGTTCTTCCAATTAGGTGGAGATCCAAAAGTTCTGGCTGGTTATATGGTCAAGAATAAAGGCTTCTTACCATCAGATCCATCAGAAATACCAATCCAGAGAGGTCAAATTAAGGAGATTGTATGCTCTTTACTTCCAGCATGTGTGGAAGACGATCCTATCTCGAAGGTTTCATTTGAACCGGATGCAATAATTGCTAATCCCCCGGCATATGGACATATGCATGTCGCGGAGGCACTAAAAGTACCAATTCATATGTTTTTCACAATGCCATGGACGCCTACTAGTGAATTCCCACATCCTTTGTCTCGTATCAAGCAATCAATTGGATATAGAATTTCATATCAAATTGTTGATGCAATGATTTGGCTTGGGATACGAGACATTATAAATGATTTTAGGAAGAAAAAGCTGAAGCTAAGACCTGTGACATATCTAAAAGGATCATATAGCTCTCCTCATGATGTGCCTTATGGATATCTCTGGAGTCCTCACCTTGTTCCTAAACCAAAAGGTCACTTTTACGTATTTCATTTATATATGATAGCGTTTTTTATTAAATTGCTACTCCAAGGTATAATCGTCAGCCCTGCACTTATTTCTCATATCGATCATTTAAAGCATCACAATAAAACCAACAACATTCAGGAGCACATTGTTTTGTTTGTTGGTTAA 1320 0.3932 MAATEESSLPVDFEVEMAAVENSSSFDFEVEISEEEGKEDSSSSGGNLFSSSGVTGITDRNLPRDNPIRPETSTSGKSNSSSSQLTNTETLRKKKRYSQFLTFMDGKVPIRKMRKLLRELATVKDGTVRFEVPEDMKSQSLDFGAGGAYNDNIIEEHVDAIDNHVPPLQIVMLIVGTRGDVQPFVAIGKGLQACGHRVRLATHSNFKEFVLNAGLEFFQLGGDPKVLAGYMVKNKGFLPSDPSEIPIQRGQIKEIVCSLLPACVEDDPISKVSFEPDAIIANPPAYGHMHVAEALKVPIHMFFTMPWTPTSEFPHPLSRIKQSIGYRISYQIVDAMIWLGIRDIINDFRKKKLKLRPVTYLKGSYSSPHDVPYGYLWSPHLVPKPKGHFYVFHLYMIAFFIKLLLQGIIVSPALISHIDHLKHHNKTNNIQEHIVLFVG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0966 439 MobiDBLite consensus disorder prediction 67 88 - -
Vvi4g0966 439 CDD GT1_Gtf-like 170 385 IPR002213 GO:0008194
Vvi4g0966 439 MobiDBLite consensus disorder prediction 42 59 - -
Vvi4g0966 439 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 170 386 - -
Vvi4g0966 439 MobiDBLite consensus disorder prediction 26 89 - -
Vvi4g0966 439 Pfam Glycosyltransferase family 28 N-terminal domain 170 314 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vvi4g0966 439 Gene3D Glycogen Phosphorylase B; 169 401 - -
Vvi4g0966 439 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 70 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0966 Vvi-Chr4 15831095 15861901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0966 80 386 Glycosyltransferase AT3G07020 65.815 1.45e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0966 K05841 - vvi:100264986 740.725