Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0958 ATGACAATGAGTGTAGTCACCAGGGAGAAAGGTTTGCTGAAGCTGGTGTATCCAGGTCGTTTTGTTGAGCTGCACAAGAATCCTGTAACTGTGGCTGAAGTCTTGAAGAAGAACCCCAGACACTGTGTCACACGCCCTGATGTCTTCAGGTTCCCATGGATTGTGGTTAGGCCAGATTCAGTTTTAAATCCTGGGAGAGTTTTCTTCGTTGTTCCCTACCACACCATTCATCGCTTGTTACAGTCAAAAGGATCCCAGGATCAGTCCTACTCCCTCCCAAAAGGGGACCCTCCTGATCACAATCAAGATCATCTTCCCCATCTTAGACAAACATCTGTATTAGATTCATGGCCAGAATTGACACCAGAGCACATAGGCTGTGAGTCATTTTTCAGTAGAAAATCTCATGTTGTGTCTCTCAATAAGCATAACTCCAAGTGTCAACCGCATGTAGTCGCCTATCTGAGCGATGACCAATCTCCTGAACAGAAGTATCCAATTGAGTGCTCAGTTAAGCTCACATCCGTCCATAGGCTTCTAAGGAAACGATCTCAAAACTTGTCCCAGAATAAGGGAAAATTCAAGCCAGAAGATTGTCGTGCAGAATGTCCTAGACAAAAATATCGAGTTGAAGCTGGCTCTAAAGTGATGAATTCAGATATGCAATACCATGATGGACTCCTTAAGAAATCTCCAATGAAGTTGCATGCCAAGATGAAAGCACAACATGATGGAGACCAACCTCCCAAGAAACGATATCCAGTTGAGAAATGGCCAACTGCCATTGATAACTACAAACATCACCAGCCACATTCTAAGCCACAAACTCCAGTCAATCCTCTTGTTGAGGCTAGACCCTTCTGTCATATCAGGCAATATGCTTTTGACACCAAAGATCTTGGCCTACAGCCCAGAACTGATCGTGGATCAGACCTCGAACATTCTAAGCAGGTCACTCAGTTGAAATCTTGTCTGAAGAAACATGAAGACAATGCTTCGAAGTCTCGAGATCTCAGGGTAACCTTTGCCTTTCCACTTGAGGATAACAGGAAGAAATTGAAAACTAAACCCTACAAGTTCCATTAG 1086 0.4383 MTMSVVTREKGLLKLVYPGRFVELHKNPVTVAEVLKKNPRHCVTRPDVFRFPWIVVRPDSVLNPGRVFFVVPYHTIHRLLQSKGSQDQSYSLPKGDPPDHNQDHLPHLRQTSVLDSWPELTPEHIGCESFFSRKSHVVSLNKHNSKCQPHVVAYLSDDQSPEQKYPIECSVKLTSVHRLLRKRSQNLSQNKGKFKPEDCRAECPRQKYRVEAGSKVMNSDMQYHDGLLKKSPMKLHAKMKAQHDGDQPPKKRYPVEKWPTAIDNYKHHQPHSKPQTPVNPLVEARPFCHIRQYAFDTKDLGLQPRTDRGSDLEHSKQVTQLKSCLKKHEDNASKSRDLRVTFAFPLEDNRKKLKTKPYKFH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0958 361 Pfam PADRE domain 9 118 IPR025322 -
Vvi4g0958 361 MobiDBLite consensus disorder prediction 82 105 - -
Vvi4g0958 361 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 10 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0958 Vvi-Chr4 15696534 15697619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0958 - - pop:7459013 144.821