Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0957 ATGGCATTGGCAGCACATCCAACTTGTTTCTCCCATGATGAAAGTACCAGTTCATGTTGTGCATCATGGCTTAAAAGAGGTGAAAGGTTTCTGAGGAAGGGGCCTGTTCATGTTCATGGAGTAGTTATGGTCAAAGTTTCCTCCAAATGCAGAAGTTCCAGACATTCCAAGCTATTAAGATCTTACAGAAATTGTATTCAGGTGGAGTCCAAATATCCAAATTTTCTCTCACACAGAACACACAAGATTTCTCCAATGTGTGGCAGTAATAACATTATACCTGAGGTAGAAGAGGTATTTGAATTTCCAGTTGCAACTGTATTGAATCTTTTAAAGAAATGGAGCCAGTTGCATTTCATGAAAGTAGTCGGTGTACTAGCTTGCACAATGTTGCTTATTCCTTCAGCCAATGCTGTTGATGCTCTCAAAACATGTACTTGCTTACTGAAGGAATGCAGGTTGGAACTCGCCAAGTGCATTGCAAACCCATCTTGCGCAGCCAATGTTGCTTGTCTCCAGACCTGCAACAACAGACCTGATGAGACTGAATGCCAGATTAAATGTGGAGACCTTTTTGAAAACAATGTGGTAGATGAATTCAACGAGTGTGCTGTCTCACGAAAGAAATGTGTGCCTAGAAAATCTGATATAGGAGAATTTCCTGTCCCAGACCCAGCTGTTCTTGTTAAGAACTTTAACATTGCAGATTTCAGTGGGAAGTGGTTCATAACTAGTGGCCTAAATCCTACATTTGATACTTTTGATTGCCAATTGCATGAATTCCACACAGAGTCCAACAAACTTGTGGGAAATTTGTCATGGCGAATACGAACTCCAGACGGTGGGTTTTTCACCCGATCAACAATGCAGAGATTTGTACAAGATCCAAACCAGCCTGGAATACTCTACAATCACGATAATGAGTATCTTCACTACCAGGATGACTGGGAAGGAATGATGCATGGGATGGATATGGCGGTGCTGTTGTGTACACAAGAAGTGCAACTTTGCCTGAAAGTATTGTACCAGAACTAG 1035 0.4155 MALAAHPTCFSHDESTSSCCASWLKRGERFLRKGPVHVHGVVMVKVSSKCRSSRHSKLLRSYRNCIQVESKYPNFLSHRTHKISPMCGSNNIIPEVEEVFEFPVATVLNLLKKWSQLHFMKVVGVLACTMLLIPSANAVDALKTCTCLLKECRLELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDIGEFPVPDPAVLVKNFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRIRTPDGGFFTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWEGMMHGMDMAVLLCTQEVQLCLKVLYQN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0957 344 Coils Coil 344 344 - -
Vvi4g0957 344 ProSitePatterns Lipocalin signature. 231 244 IPR022272 -
Vvi4g0957 344 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 12 316 IPR044682 GO:0010028|GO:0046422
Vvi4g0957 344 Pfam VDE lipocalin domain 144 317 IPR010788 GO:0046422
Vvi4g0957 344 Gene3D - 215 321 IPR012674 -
Vvi4g0957 344 SUPERFAMILY Lipocalins 220 316 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0957 K09839 - vvi:100257865 645.58