Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0954 ATGATACTCATACTCAACGTAGCATCACTGGGCTTGGTGCTGCTCCTCACCACATTATTTTCAAAGGGGAAGACACGTATCCAAGTTGTAGGATGGATATCTGCTGGAGTTAACATTGGCACATTTGTTGCTCCTCTTAGCATCATTAAACGTGTGATAGAGACAAGAAGTGTAGAGTACATGCCCTTCAACCTGTCCTTCTTCCTCACTATCTGCGCAACCATGTGGTTCTTCTATGGAATTTTTGTGAGGGATTTCTTCATTGCTATACCTAATGTGGTGGGATTTGTATTCGGGATAGCTCAAATGTTCCTTTACATTATATACAAGTACATGATGAAGAGCGATGAAACAACTCTGGAGCAGCTTGAAGAGACTACAGAAAGGCCATTGTACGTCCCAACTGCCAATCATGAACCAAGCGGCCAGGAGTTGAAGGCTGTTACTATCACGAGTCCGCGCCAGGTTGATTACTTCACTGAACACCATCCCATGTTCATGGAAAGAGATGAATACCTTTCTTAG 525 0.4343 MILILNVASLGLVLLLTTLFSKGKTRIQVVGWISAGVNIGTFVAPLSIIKRVIETRSVEYMPFNLSFFLTICATMWFFYGIFVRDFFIAIPNVVGFVFGIAQMFLYIIYKYMMKSDETTLEQLEETTERPLYVPTANHEPSGQELKAVTITSPRQVDYFTEHHPMFMERDEYLS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0954 174 FunFam Bidirectional sugar transporter SWEET 26 118 - -
Vvi4g0954 174 PANTHER RAG1-ACTIVATING PROTEIN 1 1 114 IPR047664 -
Vvi4g0954 174 Pfam Sugar efflux transporter for intercellular exchange 28 111 IPR004316 GO:0016020
Vvi4g0954 174 Gene3D - 23 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0954 Vvi-Chr4 15645934 15646649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0954 1 174 Miscellaneous Gene Families AT5G13170 41.714 8.41e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0954 K15382 - vvi:100252709 325.094