Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0947 ATGGTTCACGTGGAGGGTAATTTGGTAATAAAAGGTAATGATGATGGGCTTCATTGGAACACCACACTCAAGCTCAAACAAGAGGGGAAGGGTAGAGAGCTAAAATCAAGGCTGCTGATGGCTGTCAATGAAAGTGGACTTGCATTCATGACTCATGCAGTGGTGGGTGGGATTTATATCATACGGTATGCAGTTGGCTCCACATTGACTGAGACTCGGCATTGGGATAATCCGTGGGAGCTCATTCAGGAGAAGGCTCAACTTGTACTGCAGGAGCTTGGTTTGGCACTGGAGGAGGACTAG 303 0.4752 MVHVEGNLVIKGNDDGLHWNTTLKLKQEGKGRELKSRLLMAVNESGLAFMTHAVVGGIYIIRYAVGSTLTETRHWDNPWELIQEKAQLVLQELGLALEED* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0947 100 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 24 92 - -
Vvi4g0947 100 Gene3D Aspartate Aminotransferase, domain 1 21 96 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0947 Vvi-Chr4 15462152 15470382 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0947 K01593 - vvi:100240846 118.627