Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0939 ATGAACCCTCCACCTCCATCTCTCAGGCACCATTCATTCACTTTCCTCCCCCAAAACCCTAATACTAACATGTTGAACACGGTAACTCCAAACCCTGATCTCACCAGCACCCTCTCTGCCCTCAAAGCCCTAATCCACCAATCCGAAGCCGCCGTAACCTCCCCCCACAACCTCCTCCACCATTGCTCAGCCGCTCTCAGCCCGTGCCCCTTCGACCCACGCCACCGCATGCCGCCGGAGTTCCTCTTCCGGCACCACCTCCGATGCCCTTCATCACATTTTCCTCCTCTCGACCCCTCCATTCTCCAATCCCTTCGCTACCCCAGAACCCTCCAATCCCAAAGCCCAAATTCCTTTCTGCAACCCCTTCGTGACTCCAATTCCGAACTCTGCTTCTCCCTGGACCAGTTCGGGGATTTCGGATCGAATTTCTTCTACCGGGATTGCCCTGGAGTGGTGGAGCTCGATCGCCTTCATAGGACTTTGACTCTTCCTGGATTATTATCAGTTGAATGTGCAAATTTTGTTGGTGTTGGCGATGATGGAAGAATTGGAGGGGCTTCTAGGGAGTGTGTTAGGCTTCTTCCATCAGAGCTGTGGGAATTTAGAAGGGAAATTGGGCTGTGGAATGATTTCCCGAGTTCGTATTCCTACGCTGTTCTTCGGGTGGTTTTGTGTGCGGAAATGGTCAAAGAGGGTGATTTCTTGAAGTGGGTGATCGCAAATTCGCCTTGGTATGGTGTTGTGATTGATGTGGCTATGAGGGACCATATATTTGTGCTGTTTAGGCTTGTTTTGAAAGCAATTGTAAGGGAAGCGATTTCTTGGGATGTGAAGGGGAAAGGTTTGGAGATGAATTCAAAAACTATGAGTTTAGAGTGTCCCAATTTGGTTCAAGCAATGATGTGGTTAGCTTCTCAAATCTCTGTTTTGTATGGTGAAGCGAATGGGAAGTTCTTTGCTATAAACATGCTTAAGCAATGCCTATTCAATGTGGCATCAGGGTTGGTGTTGTTTGCATTGGAGGAAAATGTGAGTGTATCCCCTGCTTCAAAACAAGTTTCTGGGAATGTCGATGCCGATGTCAATAATATCAGGAATGCTAAACTTGAGCCACCTCAAATGGGCACAGAGTATGATGAAAGGGCAATTTTCGTGTCCCAAGTAGCAGCGGCAGTTGCAGCATTGCATGAAAGGTCCTTACTGGAACAAAAGATCAAGAGTTTGCGACTTTCTCAGCCAATTCCAAGATATCAGCTGATGGCTGAGCATGCTTGTTTGACAGCAAGAGCTGATGAAGAACGTAAAAACAATCCCAACTATAAACCTATACTCGAACATGATGGGCTTCTTTGGCAGCGATCACGTAACCAGGAATCGAGTAAGACTAGGACAAGAGAAGAGCTATTGGCTGAAGAAAGGGATTACAAACGCCGAAGAATGTCATATCGTGGCAAGAAGTTGAAGCAAACAACAACAGAGGTGATGAGGGATATAATAGAAGAATACATGGAGGAAATCAAGCAGGCTGGAGGGATTGGATGCTCTGTGAAAGGAGCTGAAGAGGGAAATGTACCTCCATCCAAACTACTTTCTTCTCATGATTCATCAACAGACACTTATGAGCTGGAAAAAATTATGCACACTTCATCTGAATCAAGAGGAGGCTCACAAGATCTCAGGAAAGAATTACCTTCTGATTATAAAGTCAGATCTACAAGATCTGATGATTCTTATTCTGATGATCATGAGCAGCATAGAAGAGTATCACATGGGTATGATGGGAATCTGGAATATCATAAAAAAAGCTTCAGTAGGGATAAACATGATAGGGAATACAATCCCAGAAGCTCAGAAAGGAACAGAAGTGATGGGCGGTCACATGAGCAGACTAGGCATAGGAGCAAGCGAGGTGATGCTGAAGTGACTAGGGTCAAGCAACATGAACTATCTTCCAGCATGCCCAAATATCGAGATAATAGAGCATTTTCATCTGTATCAAAACGTGTGAATGATTCCACCATGGAAAGAGATGATAGAAGATCAGAAGCTAAAGATAGATGGCAGAGGAAATCATATGGAAACAATTTATCAGAATCAATGGTCCAAAACTCATTTGATGATAGGTACGATCCTTCATCATTTGATGATATACTTGAGAATGATATTTCCTCTTGA 2178 0.4472 MNPPPPSLRHHSFTFLPQNPNTNMLNTVTPNPDLTSTLSALKALIHQSEAAVTSPHNLLHHCSAALSPCPFDPRHRMPPEFLFRHHLRCPSSHFPPLDPSILQSLRYPRTLQSQSPNSFLQPLRDSNSELCFSLDQFGDFGSNFFYRDCPGVVELDRLHRTLTLPGLLSVECANFVGVGDDGRIGGASRECVRLLPSELWEFRREIGLWNDFPSSYSYAVLRVVLCAEMVKEGDFLKWVIANSPWYGVVIDVAMRDHIFVLFRLVLKAIVREAISWDVKGKGLEMNSKTMSLECPNLVQAMMWLASQISVLYGEANGKFFAINMLKQCLFNVASGLVLFALEENVSVSPASKQVSGNVDADVNNIRNAKLEPPQMGTEYDERAIFVSQVAAAVAALHERSLLEQKIKSLRLSQPIPRYQLMAEHACLTARADEERKNNPNYKPILEHDGLLWQRSRNQESSKTRTREELLAEERDYKRRRMSYRGKKLKQTTTEVMRDIIEEYMEEIKQAGGIGCSVKGAEEGNVPPSKLLSSHDSSTDTYELEKIMHTSSESRGGSQDLRKELPSDYKVRSTRSDDSYSDDHEQHRRVSHGYDGNLEYHKKSFSRDKHDREYNPRSSERNRSDGRSHEQTRHRSKRGDAEVTRVKQHELSSSMPKYRDNRAFSSVSKRVNDSTMERDDRRSEAKDRWQRKSYGNNLSESMVQNSFDDRYDPSSFDDILENDISS* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0939 725 MobiDBLite consensus disorder prediction 538 655 - -
Vvi4g0939 725 MobiDBLite consensus disorder prediction 518 725 - -
Vvi4g0939 725 MobiDBLite consensus disorder prediction 693 709 - -
Vvi4g0939 725 MobiDBLite consensus disorder prediction 671 692 - -
Vvi4g0939 725 Pfam U11-48K-like CHHC zinc finger 68 90 IPR022776 -
Vvi4g0939 725 ProSiteProfiles Zinc finger CHHC U11-48K-type profile. 66 93 IPR022776 -
Vvi4g0939 725 PANTHER UNCHARACTERIZED 66 628 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0939 K13156 - vvi:100263926 1457.97