Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0936 ATGATTGCGAGAAGTTTACGGTTATTTATTCCAATGCATGACAATTTCCCTGGTCATTGGTATCTTTGCATCATTGACTTTAAAAACTGTCATATCCAAATTTTGGATTCATTGCAATTAAGGAGTCGAGACGAGTTTTGGTTTAAAAGTGTCAAAATAGTGGTTGAATTTTGTCAAACATTCTTCAAACTCTATTGA 198 0.3283 MIARSLRLFIPMHDNFPGHWYLCIIDFKNCHIQILDSLQLRSRDEFWFKSVKIVVEFCQTFFKLY* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0936 65 Pfam Ulp1 protease family, C-terminal catalytic domain 8 52 IPR003653 GO:0006508|GO:0008234
Vvi4g0936 65 SUPERFAMILY Cysteine proteinases 8 60 IPR038765 -
Vvi4g0936 65 Gene3D Adenoviral Proteinase; Chain A 3 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0936 Vvi-Chr4 15108330 15108717 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0936 - K06640 vvi:104878778 106.301