Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0934 ATGAAAAGAAAAAACAACTTAAAAGATTCAGATAATGGAGGACCCAATGCAGCTAAGCATAATCTTAAGTTGCCTATAATCGATTTTGCTGAGTTGCAAGGTTCCAATAGGCACCAAATCCTCAAGTCTCTCACTAATGCAGGTGAAGAATATCAGTTTTTTCAGTTGGTGAATCATGGGATTCCCAGTGATATCATAAGCAGCATGATTGACGTGAGCCAAAGGTTCTTTGATCTCCCCATGGAAGAAAGAGCTAAGTACATGTCTGTAGATACTCCAAAGAAACCAAGGACTTCAGAATCGAGTGAAAAACAAATAAATCAAAGATTGAAATGCACTACAAGTGTGTACATCTTGGTGCTGTTGGCTCCAAGGAGACTTTCCAGTGGCCATCTCAATAACAGTACATCCAACATTCCATTTATTAGCCAAGCTAGTAAGTTATTTTTAAAATAA 456 0.3772 MKRKNNLKDSDNGGPNAAKHNLKLPIIDFAELQGSNRHQILKSLTNAGEEYQFFQLVNHGIPSDIISSMIDVSQRFFDLPMEERAKYMSVDTPKKPRTSESSEKQINQRLKCTTSVYILVLLAPRRLSSGHLNNSTSNIPFISQASKLFLK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0934 151 FunFam Uncharacterized protein 1 140 - -
Vvi4g0934 151 Gene3D - 1 140 IPR027443 -
Vvi4g0934 151 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 21 101 - -
Vvi4g0934 151 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 106 IPR026992 -
Vvi4g0934 151 SUPERFAMILY Clavaminate synthase-like 21 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0934 Vvi-Chr4 15084285 15085366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0934 21 94 Glycosyltransferase AT5G59530 33.766 2.10e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0934 - - vvi:100265936 140.198