Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0923 ATGTCGAGCCTCTTAACATACGCGCACCTCCCCTTCAAATCCCCTTATCCTACGAATCCTCGCCGGACACTGACCCTAACTTCGGCAATCTCTTCGCCGGAAAAGAGACCACGGCGGAAGAAAAAAACAAAGCAGCCTAAGGAAGACAGCTTCGTCGCCGTCACGGCGGTGTCGGCCGGCGAGAAGGCTCTGAGACTGACGTTCATGGAGGAGCTAATGGAGCGCGCCCGGAGCGCAGATACCGCCGGAGTTTCCGAAGTGTTCTACGACATGGTTGCCGCCGGGCTCAGCCCTGGCCCTCGCTCGTTCCACGGCTTGATCGTGTCTACCGTTCTCAATGGAGACGATGAGGGCGCGATGCAATCATTGAGGAGAGAGTTAAGTGCAGGCCTTCGGCCTCTCCATGAAACATTTGTGGCATTGATTCGGTTGTTTGGTTCCAAAGGGTATGCTACCAGAGGCTTAGAAATCCTGGCAGCTATGGAAAAATTGAACTTTGACATCCGCAAAGCTTGGCTAGTTCTTGTTGAGGAGCTTGTTAGGCATAATCATCTAGAAGATGCCAACAAGGTGTTCCTGAAGGGTGCCAAAGGTGGGCTGAGAGCTACAAATGAGCTATATGATCTTTTAATCGAGGAAGACTGTAAAGTCGGGGACCATTCTAATGCCCTAACCATTGCCTACGAAATGGAGGCAGCTGGGCGTATGGCAACCACTTATCATTTCAATTGTCTCCTTAGTGTGCAGGCAACTTGTGGAATACCTGAAATAGCTTTTGCAACATTTGAGAATATGGAATATGGAGAAGATTACATGAAACCTGATACAGAGACATATAATTGGGTGATCCAAGCATATACCAGGGCTGAATCCTATGATAGGGTGCAAGATGTTGCTGAGTTACTTGGTATGATGGTCGAAGACCACAAACGCTTACAACCTAATGTGAAGACCTATGCGCTGCTGGTGGAGTGCTTGACCAAGTATTGTGTAGTACGAGAAGCTATACGACATTTCCGTGCCCTTAAAAACTTTGAAGGGGGAACTAAAGTTTTGCATGATGAAGGGAACTTTGGGGATCCACTTTCTTTGTATCTTCGGGCTTTATGTAGGGAAGGAAGGATTGTTGAGTTACTAGATGCTTTAGAAGCCATGGCCAAAGATAACCAACCAATTCCACCAAGAGCCATGATTTTGAGTAGAAAATACCGTACATTAGTTAGCTCATGGATTGAACCTTTACAAGAAGAAGCTGAACTTGGATATGAGATTGATTACATAGCAAGGTACATTGCAGAGGGAGGGCTTACAGGTGATCGCAAGCGATGGGTTCCACGAAGAGGAAAAACTCCTCTTGATCCTGATGCCCTTGGATTTATTTATTCAAACCCAATGGAAACTTCCTTCAAACAAAGATGTCTCGAGGATTGGAAGATGTACCATCGAAAGCTTTTGAAAACATTAAGGAATGAAGGACTTGCAGCCTTAGGGGAAGTATCAGAGTCAGATTATATCAGAGTAGAGGAGAGACTGAGGAAAATAATAAAGGGTCCTGACCAAAATGCTTTAAAGCCCAAGGCAGCTAGTAAAATGATAGTATCTGAACTGAAGGAAGAATTGGAAGCACAAGGTTTGCCAACTGATGGAACTAGAAATGTGCTCTACCAGCGGGTGCAAAAGGCCAGGAGAATAAATCGATCACGTGGTCGTCCCCTTTGGGTTCCTCCTGTGGAGGAGGAGGAAGAAGAGGTTGACGAAGAACTAGACGAATTAATTTCACGGATAAAGCTGCAAGAAGGTAATACAGAGTTCTGGAAGCGTCGCTTCCTTGGAGAGGACTTGACTGTTGGTCGTGGAAAGCCTATGGACAAGGAGAATTCAGAACTTCCAGATGTTCTGGATGATGCTGATATTGGAGAGGATACTGCAAAAGAGGTTGAAGATGATGAAGCTGATGAAGAGGAAGAGGAAGTGGAGCCAACTGAAAGCCAAGTAGCAGACAGAGTCAAGGACAAGGAAGTTGAAGCTGCGAAGCCTCTTCAAATGATTGGAGTCCAACTATTAAAAGATTCTGATCAAACTACTCCTGCAACGAGAAAATCAAGGAGAAAGTTGTCTCGCGCATCAATGGAGGACTCTGATGATGATGACTGGTTTCCTCTAGACATACATGAGGCGTTTAAAGAGATGAGAGAGAGAAAAATTTTTGATGTATCAGACATGTACACAATTGCTGATGTTTGGGGTTGGACTTGGGAAAAAGAACTGAAGAACAAACCTCCTCGTAGTTGGACACAGGAATGGGAAGTTGAGTTGGCAATCAAAGTAATGCTGAAGGTAATAGAATTGGGTGGGACACCAACTATTGGAGACTGTGCTATGATACTGCGAGCAGCTATAAGGGCTCCTCTCCCTTCAGCCTTCTTAAAAGTCTTGCAGACAACGCACAAACTCGGTTACGTCTTTGGGAGTCCCCTTTACAATGAAGTCATCATTCTATGTCTGGATCTTGGGGAACTGGACGCAGCCATAGCCATAGTTGCAGACATGGAGACTTCTGGAATTGCAGTCCCGGACGAAACCCTGGACAGGGTGATATCTGCTAGGCAGATGATTGATACTGCTGCCACTGATGACACATCATCACAGCAATAA 2655 0.458 MSSLLTYAHLPFKSPYPTNPRRTLTLTSAISSPEKRPRRKKKTKQPKEDSFVAVTAVSAGEKALRLTFMEELMERARSADTAGVSEVFYDMVAAGLSPGPRSFHGLIVSTVLNGDDEGAMQSLRRELSAGLRPLHETFVALIRLFGSKGYATRGLEILAAMEKLNFDIRKAWLVLVEELVRHNHLEDANKVFLKGAKGGLRATNELYDLLIEEDCKVGDHSNALTIAYEMEAAGRMATTYHFNCLLSVQATCGIPEIAFATFENMEYGEDYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRLQPNVKTYALLVECLTKYCVVREAIRHFRALKNFEGGTKVLHDEGNFGDPLSLYLRALCREGRIVELLDALEAMAKDNQPIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYIAEGGLTGDRKRWVPRRGKTPLDPDALGFIYSNPMETSFKQRCLEDWKMYHRKLLKTLRNEGLAALGEVSESDYIRVEERLRKIIKGPDQNALKPKAASKMIVSELKEELEAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEELDELISRIKLQEGNTEFWKRRFLGEDLTVGRGKPMDKENSELPDVLDDADIGEDTAKEVEDDEADEEEEEVEPTESQVADRVKDKEVEAAKPLQMIGVQLLKDSDQTTPATRKSRRKLSRASMEDSDDDDWFPLDIHEAFKEMRERKIFDVSDMYTIADVWGWTWEKELKNKPPRSWTQEWEVELAIKVMLKVIELGGTPTIGDCAMILRAAIRAPLPSAFLKVLQTTHKLGYVFGSPLYNEVIILCLDLGELDAAIAIVADMETSGIAVPDETLDRVISARQMIDTAATDDTSSQQ* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0923 884 PANTHER OS03G0856100 PROTEIN 74 561 - -
Vvi4g0923 884 ProSiteProfiles SAP motif profile. 528 562 IPR003034 -
Vvi4g0923 884 SMART sap_9 528 562 IPR003034 -
Vvi4g0923 884 MobiDBLite consensus disorder prediction 632 661 - -
Vvi4g0923 884 Gene3D Tetratricopeptide repeat domain 38 169 IPR011990 GO:0005515
Vvi4g0923 884 MobiDBLite consensus disorder prediction 616 670 - -
Vvi4g0923 884 Coils Coil 581 601 - -
Vvi4g0923 884 Pfam SAP domain 529 561 IPR003034 -
Vvi4g0923 884 MobiDBLite consensus disorder prediction 616 631 - -
Vvi4g0923 884 MobiDBLite consensus disorder prediction 695 714 - -
Vvi4g0923 884 MobiDBLite consensus disorder prediction 29 49 - -
Vvi4g0923 884 Gene3D SAP domain 516 571 IPR036361 -
Vvi4g0923 884 Gene3D Tetratricopeptide repeat domain 721 881 IPR011990 GO:0005515
Vvi4g0923 884 Gene3D Tetratricopeptide repeat domain 174 444 IPR011990 GO:0005515
Vvi4g0923 884 MobiDBLite consensus disorder prediction 685 714 - -
Vvi4g0923 884 SUPERFAMILY SAP domain 528 564 IPR036361 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0923 66 343 Glycosyltransferase AT1G05670 22.648 4.62e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0923 - - vvi:100241547 1680.61