Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0917 ATGTCAATGGACAGCTCAGTGGTTTTTTTCAGTTCTTGGATGATTCTAGCTCTATTGCTTGCATTAGGAACAACTGCTCCTCAAGCCCATGCTCGAGCTTTCTTTGTGTTTGGAGATTCGCTTGTTGACAGTGGCAACAATGACTACTTGGTGACGACTGCCCGTGCTGATTCTCCTCCTTATGGTATTGATTATCCAACTCACCGACCCACTGGCCGCTTCTCTAATGGCCTCAACATTCCAGACATTATCAGTTACGGTTTTCATCTATGCTGCATTTTTGTTTCGAGTGCAATCTCATTCTTGGTACTGAATGGAAAATTTGTGCCATGTTAG 336 0.4375 MSMDSSVVFFSSWMILALLLALGTTAPQAHARAFFVFGDSLVDSGNNDYLVTTARADSPPYGIDYPTHRPTGRFSNGLNIPDIISYGFHLCCIFVSSAISFLVLNGKFVPC* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0917 111 Gene3D SGNH hydrolase 22 102 IPR036514 -
Vvi4g0917 111 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 32 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0917 Vvi-Chr4 14427744 14428079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0917 33 77 Acyl Lipid Metabolism Gene Families AT4G10950 68.889 1.48e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0917 - - vvi:100243401 160.999