Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0914 ATGACATTCTTGATATCACGGGCACTGGCTGATCCAAATGCAGATGTTCGAGGAAGAATGATTAATGCTGGAATTCTGATTATTGATAAGCATGGAAGAGATAATGTGTCCTTGTTATTTCCAATCTTTGAGAACTACTTAAACAAAAAGACATCTGATGAAGAAAAATATGATTTGGTGCGTGAAGGTGTAGTTATTTTCACTGGAGCTTTGGCTAAACACTTAGCAAAGGATGATCCTAAAGTTCATGCTGTTGTAGAGAAGTTGTTGGATGTGTTGAACACTCCATCAGAAGCAGTTCAACGGGCAGTCTCAACATGCCTATCTCCATTGATGCAATCAAAGCAAGAAGATGCTCCAGCACTTGTCTCAAGACTGTTGGATCAACTAATGAAGAGTGATAAATATGGTGAGCGCCGTGGAGCGGCATTTGGACTTGCTGGGGTTGTTAAAGGATTTGGAATTTCTTCCCTGAAGAAGTTTGGTATTGCAACTGTACTACGAGAAGGTCTTGCAGATAGGAATTCTGCAAAGTGTCGTGAAGGAGCTTTACTAGGATTTGAGTGCCTTTGTGAGAAGCTTGGGAGATTGTTTGAACCGTATGTAATTCAAATGTTACCGTTGCTTTTGGTTTCTTTTTCCGATCAAGTTGTTGCTGTTCGTGACGGTGCTGAATGTGCTGCTCGTGCAATGATGTCTCAGCTTAGTGCTCAGGGTGTGAAGCTTGTTCTTCCATCACTTCTGAAGGGCCTTGAAGATAAAGCTTGGAGAACAAAGCAAAGTAGTGTACAACTGCTTGGTGCTATGGCTTACTGTGCTCCTCAGCAACTTTCACAGTGCCTTCCTAAGATTGTGCCAAAACTGACTGAGGTTTTAACAGACACCCATCCCAAAGTTCAGTCAGCAGGCCAAATGGCTCTTCAGCAGGTTGGGAGTGTGATCAAGAATCCAGAAATTTCGGCTCTTGTCCCTACTCTTCTAATGGGTCTTACTGACCCTAATGACTATACCAAATACTCCCTTGATATTCTCCTGCAAACAACTTTTGTTAATTCAATTGATGCTCCTTCACTTGCACTTTTGGTACCAATAGTCCATAGAGGGCTTAGGGAGAGGAGTGCTGAGACTAAAAAGAAGGCTGCTCAAATAGTTGGCAATATGTGTTCACTAGTGACGGAACCAAAGGACATGATTCCTTATATAGGCTTGCTCCTCCCTGAAGTGAAAAAAGTTCTTGTGGATCCAATTCCTGAAGTACGGTCTGTTGCAGCGAGGGCCCTAGGATCGCTTATAAGAGGGATGGGAGAAGAGAATTTCCCAGATCTTGTTTCATGGTTGTTAGACACTCTTAAATCTGATGCAAGTAACGTTGAGCGCTCTGGAGCTGCTCAAGGGTTGAGTGAGGTTTTAGCAGCACTAGGCACAGAGTACTTTGAGCACCTACTTCCTGATATAATTAGGAACTGTTCTCATCAAAGAGCATCTGTTCGTGATGGATATTTAACACTTTTCAAGTATTTGCCAAGGTCATTAGGTCTCCAATTCCAGAACTATTTGCAGCAGGTGCTGCCTGCTATATTAGATGGTCTTGCCGATGAGAATGAGTCTGTACGTGATGCAGCACTCAGTGCCGGTCATGTTCTGGTGGAGCATTATGCTACAACGTCTTTACCCTTGCTCCTTCCAGCAGTAGAAGATGGGATTTTCAATGACAATTGGCGTATCCGGCAAAGCTCTGTGGAATTGCTTGGTGATCTCTTGTTTAAGGTTGCTGGAACCTCTGGAAAAGCATTACTTGAGGGCGGTAGTGATGATGAAGGTGCTAGTACTGAAGCACATGGGCGTGCCATCATTGAGGGACTTGGAAGGGATAAACGTAATGAAGTTCTTGCTGCATTATACATGGTTCGGGCTGATGTCAGCATATCAGTTCGTCAGGCTGCATTACATGTGTGGAAGACTATAGTGGCAAATACTCCAAAGACTCTTCGGGAAATAATGCCAGTTTTAATGAATACACTGATTACTTCTCTTGCATCATCATCCTCTGAAAGGCGGCAGGTTGCTGGACGATCACTGGGTGAGCTTGTTAGGAAGCTTGGTGAAAGAGTACTTCCTTTAATCATCCCAATTTTAGCTCAAGGGCTAAAAGACCCTAAGACTAGCAGACGACAAGGTGTGTGCATTGGTTTGAGTGAAGTGATGGCCAGTGCTGGTAAGAGTCAGCTATTAAGTTTTATGGACGAGCTCATACCTACTATTCGAACTGCCCTTTGTGATAGCACGCCTGAGGTTCGCGAGTCTGCAGGCTTAGCCTTCAGCACTCTTTACAAGAGTGCTGGAATGCAAGCAATTGATGAGATAGTCCCTACGCTTTTGCACTCTTTGGAGGATGATCAAACCTCTGATACTGCACTGGATGGCCTGAAACAAATCCTTAGTGTCAGGACTACGGCTGTTTTGCCTCATATCTTGCCCAAGCTGGTTCATCTTCCTCTCACTGCCTTTAATGCACATGCTCTGGGAGCATTAGCAGAGGTTGCTGGACCTGGTCTTAACTTTCACCTGGGCATTGTTCTTCCTGCTTTACTTTCTGCCATGAGTGATGATGATACGGATGTTCAAAAACTGGCAAAGAAGGCAGCAGAAACTGTGGTCTTAGTCATTGATGAGGAAGGTGTTGAAGGTTTGATTTCAGAGCTTCTTAAAGGTGTTGGTGATAATCAGGCTTCAATACGAAGAAGTTCTTCATTTTTAATAGGATACTTCTTCAAAAACAGCAAATTATATTTGGTTGATGAAGCTCCAAACATGATAACTACCCTGATTGTTTTGCTTAGTGATTCTGATTCGGCCACTGTTGCGGTTGCTTGGGAAGCTTTGTCAAGGGTCACAAATTCAGTTCCCAAGGAAGTGCTTCCTTCATATATAAAAATAGTACGGGATGCTGTATCTACATCTAGAGATAAAGAGCGAAGAAAAAAGAAGGGAGGACCAGTTCTTATACCCGGATTCTGTCTCCCTAAAGCTCTTCAGCCATTGCTTCCAGTCTTTCTCCAGGGTCTAATAAGTGGATCAGCAGAACTAAGAGAGCAAGCAGCACAGGGTCTTGGAGAGCTGATTGAAGTGACTAGCGAACAAGCATTGAAGGAGTTTGTTATTCCAATAACAGGGCCTCTTATTCGAATCATTGGTGATCGGTTCCCTTGGCAAGTGAAGAGTGCCATCTTATCCACCTTAAGTATCATAATAAGAAAGGGTGGGATTGCCCTGAAACCTTTTCTTCCTCAACTTCAGACAACATTTATTAAGTGCCTTCAGGATAACACAAGAACTGTTCGTTCAAGTGCCGCCCTAGCACTTGGTAAGCTTAGCGCACTCAGCACTAGGGTTGACCCTTTAGTTGGAGACCTCCTATCTAGCTTGCAGGTTTCGGATGGTGGAGTACGGGAGGCCATTCTTACTGCATTAAAAGGTGTCCTGCAGCATGCTGGCAAGAGTGTGAGTGTTGCTGTTCGAACCCGTGTCTATGTCCTTTTGAAAGATTTTGTTCATCATGATGATGACCAAGTTCGAAATTCTGCTGCAAGCATATTGGGCATCCTATCACAGTATATGGAAGATGGTCAGTTGTCTGACCTGCTTCAGGAACTCTCAAGTTTGGACTCATCCCTTAGCTGGTCAGCTAGGCATGGCTCAATACTCACAATCTCGTCCATGCTTAGGCACAGTCCCTCCTCAATTTGTACATCTCCAGTGTTTCCATCAGTTGTATACTGCCTTAAAGATAACTTGAAAGATGAAAAGTTCCCTGTTCGCGAAACTTCAACAAAGGCATTAGGAAGGCTTTTACTTCATCGAGTTCAAAGTGATCCTTCAAACACCGCTGCACATTTGGATGTTCTTTCACCTATGGTATCAGCTTTGCAAGATGACTCCAGTGAAGTCAGGAGAAGGGCGTTGTCTGCCCTAAAAGCAGTTGCAAAAGCAAACCCTTCAGCCCTTATGACCCATATTACAATTTTTGGTCCTGCACTTGCTGAATGTTTGAAGGATGGAAATACTCCAGTGAGACTTGCTGCCGAAAGATGTGCCTTGCACGCCTTCCAATTGACTAAGGGTACAGAAAATGTTCAAGCTGCGCAAAAGTTTATCACAGGCTTGGATGCTAGGCGACTGTCTAAGTTTCCTGAACACAGTGATGACAGTGAAGACAATGAAGATGACCCAACAAGTGGCTGA 4242 0.4389 MTFLISRALADPNADVRGRMINAGILIIDKHGRDNVSLLFPIFENYLNKKTSDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVEKLLDVLNTPSEAVQRAVSTCLSPLMQSKQEDAPALVSRLLDQLMKSDKYGERRGAAFGLAGVVKGFGISSLKKFGIATVLREGLADRNSAKCREGALLGFECLCEKLGRLFEPYVIQMLPLLLVSFSDQVVAVRDGAECAARAMMSQLSAQGVKLVLPSLLKGLEDKAWRTKQSSVQLLGAMAYCAPQQLSQCLPKIVPKLTEVLTDTHPKVQSAGQMALQQVGSVIKNPEISALVPTLLMGLTDPNDYTKYSLDILLQTTFVNSIDAPSLALLVPIVHRGLRERSAETKKKAAQIVGNMCSLVTEPKDMIPYIGLLLPEVKKVLVDPIPEVRSVAARALGSLIRGMGEENFPDLVSWLLDTLKSDASNVERSGAAQGLSEVLAALGTEYFEHLLPDIIRNCSHQRASVRDGYLTLFKYLPRSLGLQFQNYLQQVLPAILDGLADENESVRDAALSAGHVLVEHYATTSLPLLLPAVEDGIFNDNWRIRQSSVELLGDLLFKVAGTSGKALLEGGSDDEGASTEAHGRAIIEGLGRDKRNEVLAALYMVRADVSISVRQAALHVWKTIVANTPKTLREIMPVLMNTLITSLASSSSERRQVAGRSLGELVRKLGERVLPLIIPILAQGLKDPKTSRRQGVCIGLSEVMASAGKSQLLSFMDELIPTIRTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILSVRTTAVLPHILPKLVHLPLTAFNAHALGALAEVAGPGLNFHLGIVLPALLSAMSDDDTDVQKLAKKAAETVVLVIDEEGVEGLISELLKGVGDNQASIRRSSSFLIGYFFKNSKLYLVDEAPNMITTLIVLLSDSDSATVAVAWEALSRVTNSVPKEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGLISGSAELREQAAQGLGELIEVTSEQALKEFVIPITGPLIRIIGDRFPWQVKSAILSTLSIIIRKGGIALKPFLPQLQTTFIKCLQDNTRTVRSSAALALGKLSALSTRVDPLVGDLLSSLQVSDGGVREAILTALKGVLQHAGKSVSVAVRTRVYVLLKDFVHHDDDQVRNSAASILGILSQYMEDGQLSDLLQELSSLDSSLSWSARHGSILTISSMLRHSPSSICTSPVFPSVVYCLKDNLKDEKFPVRETSTKALGRLLLHRVQSDPSNTAAHLDVLSPMVSALQDDSSEVRRRALSALKAVAKANPSALMTHITIFGPALAECLKDGNTPVRLAAERCALHAFQLTKGTENVQAAQKFITGLDARRLSKFPEHSDDSEDNEDDPTSG* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0914 1413 Gene3D - 1132 1412 IPR011989 -
Vvi4g0914 1413 SUPERFAMILY ARM repeat 40 827 IPR016024 -
Vvi4g0914 1413 ProSiteProfiles HEAT repeat profile. 1014 1052 IPR021133 -
Vvi4g0914 1413 Pfam HEAT repeat 750 778 IPR000357 GO:0005515
Vvi4g0914 1413 SUPERFAMILY ARM repeat 838 1376 IPR016024 -
Vvi4g0914 1413 Gene3D - 832 1069 IPR011989 -
Vvi4g0914 1413 Gene3D - 437 601 IPR011989 -
Vvi4g0914 1413 Gene3D - 603 831 IPR011989 -
Vvi4g0914 1413 Gene3D - 112 436 IPR011989 -
Vvi4g0914 1413 ProSiteProfiles HEAT repeat profile. 750 787 IPR021133 -
Vvi4g0914 1413 FunFam eIF-2-alpha kinase activator gcn1 118 436 - -
Vvi4g0914 1413 FunFam eIF-2-alpha kinase activator GCN1 437 598 - -
Vvi4g0914 1413 ProSiteProfiles HEAT repeat profile. 404 442 IPR021133 -
Vvi4g0914 1413 ProSiteProfiles HEAT repeat profile. 522 557 IPR021133 -
Vvi4g0914 1413 ProSiteProfiles HEAT repeat profile. 859 897 IPR021133 -
Vvi4g0914 1413 MobiDBLite consensus disorder prediction 1394 1413 - -
Vvi4g0914 1413 FunFam GCN1, eIF2 alpha kinase activator homolog 599 836 - -
Vvi4g0914 1413 PANTHER TRANSLATIONAL ACTIVATOR GCN1-RELATED 6 1400 - -
Vvi4g0914 1413 SMART TOG_3 111 343 IPR034085 -
Vvi4g0914 1413 SMART TOG_3 547 808 IPR034085 -
Vvi4g0914 1413 SMART TOG_3 1000 1234 IPR034085 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0914 - - vvi:100248532 2660.56