Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0912 ATGGGTGGATCGCCATCTTCTTCTTCTGTTGTTATCCTTCCTCTTTGTTTGACTTTCTTCTTGGCCATTTTCTTGGAAAGATCAGTGGGTGTTGTTTCAGGTTTGGAATACTCTAAGGACAAGCAACCAAGTGGCTTGACACTTGAAAGGATTCAAAAGCACTCGAACAAGATCAATAAGCCTACTGTCATGACCATTGAGAGCCCAGATGGAGATATAATAGATTGCATTGATAAATGGAAACAACCTGCTTTTGATCATCCTCTTCTCAAGAATCATAAGCTTCAGGTACACAAAGTCTATTCCAAACAAGAGGAAGTGAAGAGAGATAACCATATTTCAAGTAGGAAGAACGAAGAAAGAATGGTGATTAGTGGGAGAGGTGCATGGCAAGTGTGGCATCAAAATAGGACAAGGGCCCAATCACTCCATGATTTTGGGAAGAAACAACCAAGAATGGCTCTTGCTAGGCACACCATTGCTCCTGATGATATCCGTAACAATGACCATGAGTATGCGTACGTGAGCTCGCAATCACCGGAAGGGGTGTACGGAGCATATGCAGAAATAAGCTTGTGGAACCCATCCGTACAAGATGGTGAGATGAGCATCTCCCATATTTGGGTTGTTGCTGGATCATTCAGTGGCTCAGATCTCAACACCATGGACGCTGGATGGCAGGTCCAGCCACATCTGTATGGTGATAGGAGCACCAGATTCTTCGCTTATTGGCCGCCGATGGATATAAATCAATAG 756 0.4405 MGGSPSSSSVVILPLCLTFFLAIFLERSVGVVSGLEYSKDKQPSGLTLERIQKHSNKINKPTVMTIESPDGDIIDCIDKWKQPAFDHPLLKNHKLQVHKVYSKQEEVKRDNHISSRKNEERMVISGRGAWQVWHQNRTRAQSLHDFGKKQPRMALARHTIAPDDIRNNDHEYAYVSSQSPEGVYGAYAEISLWNPSVQDGEMSISHIWVVAGSFSGSDLNTMDAGWQVQPHLYGDRSTRFFAYWPPMDINQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0912 251 Pfam Neprosin 200 245 IPR004314 -
Vvi4g0912 251 Pfam Neprosin activation peptide 65 137 IPR025521 -
Vvi4g0912 251 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 51 244 - -
Vvi4g0912 251 Gene3D - 194 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0912 Vvi-Chr4 14265392 14267197 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0912 - - vri:117913252 360.533