Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0910 ATGGGCGGTCTTCTAAAAAGGAAGAGAAGATCCTCATCTTCTTCTTCTGTTGTTCTTCTTCCTCTTTTTTGGGCTTTTTTCTTAGCCATTTTCTTGGAAAGGTTAGTGGGTGTTGTTTCAGGTTTGGAGTACTCTAAGGACAAGCAAGCAAGTAGCTTGACACTTGAGAGGATTCAGAAGCACTTGGACAAGATCAATAAGCCAGCAGTCATGACCATTGAGAGTCCAGATGGAGATATCATAGATTGCATTGATAAATGGAAGCAACCTGCTTTTGATCATCCTCTTCTCAAGAATCATAAGCTTCAGTTGGTTCCACCAGAGATGCCAAAAGTGAGGAGAATGAAAGAAGAGGAAGTGAAGGGAGATAAACATATTTCAAGTAGGAAGAATGAAGAAAGGGTGGTGATAAGTGGGAGAGGTGCATGGCAAGTATGGCATCAAAATAGGACAAGGTGCCCCGAGGGCACAGTGCCCATCAGGAGGACCACGGTGGATGACGTGTTGAGGGCCCAATCTCTCTATGATTTTGGGAAGAAACAACCAAGAATGGCTCTTGCTAGGCACACCGTTTCCCCAGATGATGTTAATGCCACAGGCCATGAGTATGCGATCGCGAGCTCGAGCCCATCGGAAGCTGTGTACGGAGCATCTGCAACAATAAACTTGTGGAACCCATCCGTACAAGTGAAGGAAGAGATGAGTATCTCCCAGATTTGGGTTCTTGCCGGATCATTCGAGGGCTCAGATCTGAATAGCGTAGAAGCTGGGTGGCATGTTCTGCCGAATTTGTATGGTGACAACAGCACCAGATTATTTGTTTATTGGACGGCAGATGGATATCAATCAACAGGGTGTTACAACACTCTATGTCCAGGATTTGTGCAGGTGGACAAAGAAATAGTTGTGGGAACGGCCATTGCTCCGGTCTCCACCATCTCCGGCAAGCTATACGAAAGTAATATTTTCATATGGAAGGATCCAAAGACGGAAAATTGGTGGCTGGGGTACGAGAACAACAATGCAGTGGGATACTGGCCATCAAACCTGTTCACACACTTAGCAGCGAATGCGACGCTGGTGGAGTGGGGTGGGGAGGTGTTGAATACCAAGCCCAACGGCGCCCACACTTCCACCCAAATGGGCTCAGGCCGGTTCGCCCAGGAGGGCAATGGAAAGGCCAGCTATTTCCGAAACCTGGGACTTGTCGATTCAAATAACGACATCAACCCACCCCAAAGCACATCCACCCGAGCCGATAATAGCAATTGCTACAGCATAAATCTCCTCAACAACAACGATTGGGGCACTCACTTCTTCTACGGGGGACCTGGATTTAATCCCAACTGCCCTTAG 1356 0.4757 MGGLLKRKRRSSSSSSVVLLPLFWAFFLAIFLERLVGVVSGLEYSKDKQASSLTLERIQKHLDKINKPAVMTIESPDGDIIDCIDKWKQPAFDHPLLKNHKLQLVPPEMPKVRRMKEEEVKGDKHISSRKNEERVVISGRGAWQVWHQNRTRCPEGTVPIRRTTVDDVLRAQSLYDFGKKQPRMALARHTVSPDDVNATGHEYAIASSSPSEAVYGASATINLWNPSVQVKEEMSISQIWVLAGSFEGSDLNSVEAGWHVLPNLYGDNSTRLFVYWTADGYQSTGCYNTLCPGFVQVDKEIVVGTAIAPVSTISGKLYESNIFIWKDPKTENWWLGYENNNAVGYWPSNLFTHLAANATLVEWGGEVLNTKPNGAHTSTQMGSGRFAQEGNGKASYFRNLGLVDSNNDINPPQSTSTRADNSNCYSINLLNNNDWGTHFFYGGPGFNPNCP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0910 451 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 58 447 - -
Vvi4g0910 451 Gene3D - 223 341 - -
Vvi4g0910 451 Pfam Neprosin activation peptide 72 206 IPR025521 -
Vvi4g0910 451 Pfam Neprosin 232 444 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0910 Vvi-Chr4 14226255 14228871 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0910 - - vvi:100267316 884.019