Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0906 ATGGGTGGTCTTCTACAAAGGAAGAGAAGATACTCATCTTCTTCTTCTGTTGTTCTTCTACCTCTTTTTTGGGCTTTTTTCTTAGCCATTTTCTTGGAAAGATCAGTCGATATTGTTTCAGGTTTGGAGTACTCTAAGGACAAGCAAGCAAGTAGCTTGACGCTTGAGAGGATTCAGAAGCACTTAGACAAGATCAATAAGCCTGCTGTCATGACCATTGAGAGCCCAGATGGAGATATCATAGATTGCATTGATAAATGGAAACAACCTGCTTTTGATCATCCTCTTCTCAAGAATCATAAGCTTCAGTTGGTTCCACCAGAGATGCCAAGAGTGAGGAGAATGAAAGAAGAGGAAGTGAAGGGAGACAAACATACTTCAAGTAGGAAGAATGAAGAAAGGGTGGTGATTAGTGGGAGAGGTGCATGGCAAGTATGGCATCAAAATAGGACAAGGTGCCCCAAGGGCACAGTGCCCATCAGGAGGACCACGGTGGATGATGTGTTGAGGGCCAAATCTCTCTATGATTTTGGGAAGAAGCAACCAAGAATGGCTCTAGCCAGGCACACCGTTTCCCCGGATGATGTTAATGCCAAAGGCCATGAGTATGCCATCGCGACCTCGAGACCATCGGAGGCGGTGTACGGAGCATCTGCAACAATAAACGTGTGGAACCCATCCTTACAAGTGGAGGAAGAGATGAGTATCTCCCAGATTTGGGTTCTTGCCGGATCATTCGAGGGGTCAGATCTGAATAGCGTAGAAGCTGGGTGGCATGTTCTGCCGGATCTGCATGGCGACAAGAGCACCAGATTATTTGCTTATTGGACGGCAGATGGATATCAATCAACAGGGTGTTACAACACTCTATGTCCAGGATTTGTGCAGGTGGACAAAGAAATAGTTGTGGGAACGGCCATTGCTCCGGTCTCCACCATCTCCGGCGAGCTATACGAAAGTAATATTTTCATATGGAAGGATCCAAAGACGGAAAATTGGTGGCTGGGGTACGGGAACAACAATGCAGTGGGATACTGGCCGTCAAACCTGTTCACACACTTAGCAGCGAATGCGACGCTGGTGGAGTGGGGTGGGGAGGTGTTCAATTCCAAGCCCAACGGCGCCCACACTTCCACCCAAATGGGCTCAGGCCGCTTCGCCCAAGAGGGCAATGGAAAGGCCAGCTATTTCCGAAACCTGGGACTTGTCGATTCAAATAACGACATCAACCCACCCCAAAGCATATCCACCCAAGCCGATAATAGCAATTGCTACAACATAAATCTCCTCAACAACAATGATGATTGGGGCACTCACTTCTATTTTGGGGGACCTGGATTTAATCCTAACTGCCCTTAG 1359 0.4761 MGGLLQRKRRYSSSSSVVLLPLFWAFFLAIFLERSVDIVSGLEYSKDKQASSLTLERIQKHLDKINKPAVMTIESPDGDIIDCIDKWKQPAFDHPLLKNHKLQLVPPEMPRVRRMKEEEVKGDKHTSSRKNEERVVISGRGAWQVWHQNRTRCPKGTVPIRRTTVDDVLRAKSLYDFGKKQPRMALARHTVSPDDVNAKGHEYAIATSRPSEAVYGASATINVWNPSLQVEEEMSISQIWVLAGSFEGSDLNSVEAGWHVLPDLHGDKSTRLFAYWTADGYQSTGCYNTLCPGFVQVDKEIVVGTAIAPVSTISGELYESNIFIWKDPKTENWWLGYGNNNAVGYWPSNLFTHLAANATLVEWGGEVFNSKPNGAHTSTQMGSGRFAQEGNGKASYFRNLGLVDSNNDINPPQSISTQADNSNCYNINLLNNNDDWGTHFYFGGPGFNPNCP* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0906 452 Pfam Neprosin 232 445 IPR004314 -
Vvi4g0906 452 Pfam Neprosin activation peptide 72 206 IPR025521 -
Vvi4g0906 452 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 58 448 - -
Vvi4g0906 452 Gene3D - 225 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0906 Vvi-Chr4 14126029 14128649 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0906 - - vvi:100253522 913.679