Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0901 ATGCAAGAAAGAGAGGAGGCAGAGGAGTTGGTGACGCCAGGAGAGGTGTTGGGGAAGGGTTCGCAACTCAAGGCAGGGAGGGGAGCCTACTTCTTACCCCAAAATGGCACCGTTTATGCTTCCCTCACTGGTCGCCGCTCTCTCATCCCTCCTTCTCCCCTTTCATCTGACCAGAGGCCAACTGTCGAAGTAACAGGTCATAGTGCCCATGGTGCCATTCCTGAGCCTGGTTCCATTGTCATTGCCAGGGTTACTAAAGTTATGGCTAGAATGGCCTCAGCTGATATAATGTGTGTTGGCCCCAAGTCTGTGCGAGAAAAATTTACTGGAATAATTAGGCAACAAGATGTTAGAGCAACAGAAATAGACAAAGTGGATATGCACTCGTCTTTTCGCCCTGGTGACATTGTCAGAGCTCTAGTTCTCTCCCTCGGAGATGCACGGGCATACTTTCTATCAACTGCAAAGAATGAACTGGGAGTTGTATCTGCAGAGAGCGCAGCAGGTGCAACTATGGTTCCAATGAGCTGGACGGAGATGCAGTGCCCATTGACAGGACAAATAGAACAAAGAAAGGTTGCGAAAGTTGGAGGGCAAGCCTAA 603 0.4959 MQEREEAEELVTPGEVLGKGSQLKAGRGAYFLPQNGTVYASLTGRRSLIPPSPLSSDQRPTVEVTGHSAHGAIPEPGSIVIARVTKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHSSFRPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESAAGATMVPMSWTEMQCPLTGQIEQRKVAKVGGQA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0901 200 Pfam Exosome complex exonuclease RRP4 N-terminal region 10 47 IPR025721 -
Vvi4g0901 200 FunFam Chromosome 1, whole genome shotgun sequence 67 197 - -
Vvi4g0901 200 SUPERFAMILY Ribosomal L27 protein-like 10 46 - -
Vvi4g0901 200 Gene3D - 8 48 - -
Vvi4g0901 200 PANTHER 3'-5' EXORIBONUCLEASE CSL4-RELATED 1 197 IPR039771 GO:0000178|GO:0006396
Vvi4g0901 200 CDD S1_CSL4 73 162 - -
Vvi4g0901 200 Pfam Exosome component EXOSC1/CSL4 103 144 IPR019495 GO:0000178|GO:0003723
Vvi4g0901 200 SUPERFAMILY Nucleic acid-binding proteins 73 193 IPR012340 -
Vvi4g0901 200 Gene3D - 67 199 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0901 K07573 - vvi:100263947 387.111