Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0897 ATGGGAAACTTTGATTTCCATTTAAATCTCCCCCATCGTCCAATACTTCATCTTTTAAATGTTCTTATCATCATCTCCCTCATCCCTTCTTCTGTATCTGAGATCAAGAACACACGCATCATAGATGATTCTCGTCCCATGATCCTGTTTGAGCGATTCGGATTTGCCCAATATGGAAATGTGGCGGTTTCAGTGAGAGATTTTTCATGGAAATCAACCCGACAGAATGCAGAATTCGAACCTTCTTCAATGGGGTTCTTTCTGGTTAGAGATGTATCATTTCCAAGCATATTCAACGAGTCCGAATATGCAGATAACTTTTGTATTCTATGGAGTCGGTTTGTGAAAATCATCTTCAAATTCGATAACCTTGCTGCCTACAATGGTTCTATGCTGATAGAAGAACCAGATGAGTACAGTTTGATTTTCGGAAACTGCCAATCAGAAACACAAGTTTCGATGGATGTTCATACTGAGATGTACAACATACTAGACGGCAACAAAAATTTTCTGCCTGCTGGCCAAACCCCATTGCCAAGACTGTATTTCATATTCTTTCTCATATACTCAATCTTTGTCAGCGTGTGGATCTTCATTTGTATCAAGCAAAGGCCGGATATCCATAAAATCCATATGATAATGGGGGCATTGCTTCTCTTCAAGGCACTGAAAATGATATGTGCCTCAGAGGACAAAATGTATGTGAGGAAAACAGGCACACCCCATGGATGGGACGTGGCCTATTACGTATTCGGGTTCTTCAAGGGTATAATGCTGTTCACTGTGATAGTGCTCATAGGCACGGGGTGGTCGTTCTTGAAACCGTATCTGCAAGAGCGGGAGAAGAAGGTTTTGATGGTAGTGATTCCACTGCAAGTGATGGAGAACATTGCTTCAGTGATTATTGCTGAAACGGGGCCTGCAACAAAGGATTGGTTGACATGGAACCAGATATTCTTGTTGTTGGATGTGGCATGCTGTTGTGCTGTTTTCTTACCCATTGTTTGGTCCATCAGAGGCCTGCGGGAGGCCTCCAAGACCGATGGCAAGGCTGCTAGGAACCTGGAGAAGCTCACTCTCTTCAAGCACTTCTACATTGTTGTGGTGGGCTACTTGTACTTCACCAGAATCGTGGTTTCAGCGGTATCGTCTGTTATCAGTTATCGATTTGAATGGGTTATGACTGCTGCTGATGAAGGTGCAAGCTTAGCTTTCTATCTCTTTATTTTCCATAACTTTCAGCCCACCCAGAAGAATCCATATCTTGTGATTGATGACAAGGATGAGGCTGCGGCAGCTCATATGCTTGAAGAAGATGATTCATTTGAGCTCTAG 1335 0.4292 MGNFDFHLNLPHRPILHLLNVLIIISLIPSSVSEIKNTRIIDDSRPMILFERFGFAQYGNVAVSVRDFSWKSTRQNAEFEPSSMGFFLVRDVSFPSIFNESEYADNFCILWSRFVKIIFKFDNLAAYNGSMLIEEPDEYSLIFGNCQSETQVSMDVHTEMYNILDGNKNFLPAGQTPLPRLYFIFFLIYSIFVSVWIFICIKQRPDIHKIHMIMGALLLFKALKMICASEDKMYVRKTGTPHGWDVAYYVFGFFKGIMLFTVIVLIGTGWSFLKPYLQEREKKVLMVVIPLQVMENIASVIIAETGPATKDWLTWNQIFLLLDVACCCAVFLPIVWSIRGLREASKTDGKAARNLEKLTLFKHFYIVVVGYLYFTRIVVSAVSSVISYRFEWVMTAADEGASLAFYLFIFHNFQPTQKNPYLVIDDKDEAAAAHMLEEDDSFEL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0897 444 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 22 432 IPR009637 GO:0016020
Vvi4g0897 444 Pfam Lung seven transmembrane receptor 139 420 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0897 Vvi-Chr4 13912800 13914134 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0897 - - vvi:100246790 858.596